Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 KRT8P50-201ENST00000562022 1438 ntBASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 RPL13AP23-201ENST00000480739 586 ntBASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 AL357033.4-201ENST00000617703 1807 ntBASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 MINOS1P3-201ENST00000457048 203 ntBASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 RNPS1P1-201ENST00000507437 918 ntBASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 AC139887.3-201ENST00000568585 713 ntBASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NOTCH3Q9UM47 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 AC092183.1-201ENST00000469884 875 ntBASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 RN7SL606P-201ENST00000472779 293 ntBASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 AC096582.2-201ENST00000510860 516 ntBASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 AC145285.3-201ENST00000564603 959 ntBASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 AL139424.1-201ENST00000607572 797 ntBASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 AC116562.4-201ENST00000641316 2276 ntBASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 POM121L3P-201ENST00000419331 1163 ntBASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 PMS2P7-201ENST00000506558 1336 ntBASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms