Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CXXC1Q9P0U4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CXXC1Q9P0U4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CXXC1Q9P0U4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CXXC1Q9P0U4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.18■□□□□ 0.66
CXXC1Q9P0U4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.18■□□□□ 0.66
CXXC1Q9P0U4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CXXC1Q9P0U4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CXXC1Q9P0U4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.18■□□□□ 0.66
CXXC1Q9P0U4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CXXC1Q9P0U4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CXXC1Q9P0U4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CXXC1Q9P0U4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CXXC1Q9P0U4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.18■□□□□ 0.66
CXXC1Q9P0U4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 FAM58CP-201ENST00000435741 640 ntBASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 KRT19P2-202ENST00000557173 1012 ntBASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 BCAR1-209ENST00000546196 1340 ntBASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.17■□□□□ 0.66
CXXC1Q9P0U4 SIRPAP1-201ENST00000448467 1770 ntBASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 AC004449.1-201ENST00000564240 433 ntBASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CXXC1Q9P0U4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms