Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 PTDSS2-212ENST00000531520 890 ntTSL 328.8■■■□□ 2.21e-6■■□□□ 11.5
DROSHAQ9NRR4 NR2C2-207ENST00000435454 495 ntTSL 325.96■■□□□ 1.751e-6■■□□□ 11.5
DROSHAQ9NRR4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.71e-6■■□□□ 11.5
DROSHAQ9NRR4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC23.78■■□□□ 1.41e-6■■□□□ 11.5
DROSHAQ9NRR4 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.171e-6■■□□□ 11.5
DROSHAQ9NRR4 PTDSS2-205ENST00000526878 3134 ntTSL 216.07■□□□□ 0.161e-6■■□□□ 11.5
DROSHAQ9NRR4 NR2C2-210ENST00000475707 3308 ntTSL 212.1□□□□□ -0.471e-6■■□□□ 11.5
DROSHAQ9NRR4 GIPR-206ENST00000591224 782 ntTSL 224.84■■□□□ 1.576e-7■■□□□ 11.5
DROSHAQ9NRR4 SETD1A-202ENST00000452917 315 ntTSL 234.2■■■■□ 3.072e-6■■□□□ 11.5
DROSHAQ9NRR4 PLEKHA1-202ENST00000368989 3771 ntTSL 5 BASIC16.69■□□□□ 0.262e-6■■□□□ 11.5
DROSHAQ9NRR4 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.842e-6■■□□□ 11.5
DROSHAQ9NRR4 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.872e-6■■□□□ 11.5
DROSHAQ9NRR4 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC8.7□□□□□ -1.022e-6■■□□□ 11.5
DROSHAQ9NRR4 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.182e-6■■□□□ 11.5
DROSHAQ9NRR4 FBXO11-209ENST00000492225 2216 ntTSL 1 (best)18.12■□□□□ 0.498e-15■■□□□ 11.5
DROSHAQ9NRR4 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC10.75□□□□□ -0.698e-15■■□□□ 11.5
DROSHAQ9NRR4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.292e-9■■□□□ 11.5
DROSHAQ9NRR4 TMUB1-206ENST00000488752 584 ntTSL 234.58■■■■□ 3.132e-9■■□□□ 11.5
DROSHAQ9NRR4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC30.86■■■□□ 2.532e-9■■□□□ 11.5
DROSHAQ9NRR4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC26.45■■□□□ 1.822e-9■■□□□ 11.5
DROSHAQ9NRR4 NAP1L4-203ENST00000430811 860 ntTSL 239.62■■■■□ 3.932e-9■■□□□ 11.5
DROSHAQ9NRR4 GRB2-207ENST00000577711 555 ntTSL 231.27■■■□□ 2.62e-9■■□□□ 11.5
DROSHAQ9NRR4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC30.47■■■□□ 2.472e-9■■□□□ 11.5
DROSHAQ9NRR4 PSMB5-201ENST00000334454 796 ntTSL 529.17■■■□□ 2.262e-9■■□□□ 11.5
DROSHAQ9NRR4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC29.17■■■□□ 2.262e-9■■□□□ 11.5
DROSHAQ9NRR4 SUGP1-211ENST00000590439 764 ntTSL 529.16■■■□□ 2.262e-9■■□□□ 11.5
DROSHAQ9NRR4 NAP1L4-213ENST00000526842 535 ntTSL 527.79■■■□□ 2.042e-9■■□□□ 11.5
DROSHAQ9NRR4 SUGP1-202ENST00000535070 1094 ntTSL 226.08■■□□□ 1.772e-9■■□□□ 11.5
DROSHAQ9NRR4 SUGP1-204ENST00000585763 826 ntTSL 525.57■■□□□ 1.682e-9■■□□□ 11.5
DROSHAQ9NRR4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC25.2■■□□□ 1.632e-9■■□□□ 11.5
DROSHAQ9NRR4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC24.76■■□□□ 1.552e-9■■□□□ 11.5
DROSHAQ9NRR4 SUGP1-215ENST00000606725 728 ntTSL 324.3■■□□□ 1.482e-9■■□□□ 11.5
DROSHAQ9NRR4 SUGP1-208ENST00000588580 715 ntTSL 224.3■■□□□ 1.482e-9■■□□□ 11.5
DROSHAQ9NRR4 SUGP1-207ENST00000587716 559 ntTSL 424.19■■□□□ 1.462e-9■■□□□ 11.5
DROSHAQ9NRR4 SUGP1-209ENST00000588731 2282 ntTSL 1 (best)23.81■■□□□ 1.42e-9■■□□□ 11.5
DROSHAQ9NRR4 SUGP1-206ENST00000587119 2177 ntTSL 222.86■■□□□ 1.252e-9■■□□□ 11.5
DROSHAQ9NRR4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC22.46■■□□□ 1.192e-9■■□□□ 11.5
DROSHAQ9NRR4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.172e-9■■□□□ 11.5
DROSHAQ9NRR4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.12e-9■■□□□ 11.5
DROSHAQ9NRR4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC20.9■□□□□ 0.942e-9■■□□□ 11.5
DROSHAQ9NRR4 SUGP1-201ENST00000247001 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.492e-9■■□□□ 11.5
DROSHAQ9NRR4 NAP1L4-221ENST00000534372 544 ntTSL 516.42■□□□□ 0.222e-9■■□□□ 11.5
DROSHAQ9NRR4 SUGP1-213ENST00000591350 601 ntTSL 415.43■□□□□ 0.062e-9■■□□□ 11.5
DROSHAQ9NRR4 NAP1L4-219ENST00000531291 572 ntTSL 511.56□□□□□ -0.562e-9■■□□□ 11.5
DROSHAQ9NRR4 NAP1L4-216ENST00000528968 587 ntTSL 510.67□□□□□ -0.72e-9■■□□□ 11.5
DROSHAQ9NRR4 NAP1L4-217ENST00000529361 555 ntTSL 510.36□□□□□ -0.752e-9■■□□□ 11.5
DROSHAQ9NRR4 NAP1L4-220ENST00000532325 526 ntTSL 58.54□□□□□ -1.042e-9■■□□□ 11.5
DROSHAQ9NRR4 NAP1L4-204ENST00000448187 888 ntTSL 56.12□□□□□ -1.432e-9■■□□□ 11.5
DROSHAQ9NRR4 NAP1L4-202ENST00000399614 594 ntTSL 46.06□□□□□ -1.442e-9■■□□□ 11.5
DROSHAQ9NRR4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.533e-7■■□□□ 11.5
DROSHAQ9NRR4 MIF-202ENST00000465752 589 ntTSL 1 (best)27.93■■■□□ 2.063e-7■■□□□ 11.5
DROSHAQ9NRR4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.253e-7■■□□□ 11.5
DROSHAQ9NRR4 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.855e-9■■□□□ 11.5
DROSHAQ9NRR4 CUL1-203ENST00000602748 3054 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.265e-9■■□□□ 11.5
DROSHAQ9NRR4 CUL1-202ENST00000409469 2857 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.085e-9■■□□□ 11.5
DROSHAQ9NRR4 PTOV1-215ENST00000600793 426 ntTSL 519.55■□□□□ 0.726e-8■■□□□ 11.5
DROSHAQ9NRR4 ARHGDIA-216ENST00000584397 622 ntTSL 238.19■■■■□ 3.75e-6■■□□□ 11.5
DROSHAQ9NRR4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC37.08■■■■□ 3.535e-6■■□□□ 11.5
DROSHAQ9NRR4 ARHGDIA-213ENST00000583499 560 ntTSL 237.05■■■■□ 3.525e-6■■□□□ 11.5
DROSHAQ9NRR4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC36.63■■■■□ 3.455e-6■■□□□ 11.5
DROSHAQ9NRR4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC34.45■■■■□ 3.115e-6■■□□□ 11.5
DROSHAQ9NRR4 ARHGDIA-211ENST00000582984 823 ntTSL 334.03■■■■□ 3.045e-6■■□□□ 11.5
DROSHAQ9NRR4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC30.51■■■□□ 2.475e-6■■□□□ 11.5
DROSHAQ9NRR4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.455e-6■■□□□ 11.5
DROSHAQ9NRR4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.327e-11■■□□□ 11.5
DROSHAQ9NRR4 ARHGDIA-212ENST00000583111 574 ntTSL 229.49■■■□□ 2.315e-6■■□□□ 11.5
DROSHAQ9NRR4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.97e-11■■□□□ 11.5
DROSHAQ9NRR4 TAF15-206ENST00000603967 656 ntTSL 326.52■■□□□ 1.847e-11■■□□□ 11.5
DROSHAQ9NRR4 TAF15-210ENST00000604694 891 ntTSL 526.52■■□□□ 1.847e-11■■□□□ 11.5
DROSHAQ9NRR4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC26.36■■□□□ 1.815e-6■■□□□ 11.5
DROSHAQ9NRR4 ARHGDIA-206ENST00000580033 547 ntTSL 426.34■■□□□ 1.815e-6■■□□□ 11.5
DROSHAQ9NRR4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.397e-11■■□□□ 11.5
DROSHAQ9NRR4 ARHGDIA-215ENST00000583868 815 ntTSL 321.32■■□□□ 15e-6■■□□□ 11.5
DROSHAQ9NRR4 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.895e-6■■□□□ 11.5
DROSHAQ9NRR4 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC20.44■□□□□ 0.865e-6■■□□□ 11.5
DROSHAQ9NRR4 ARHGDIA-204ENST00000578351 421 ntTSL 418.76■□□□□ 0.595e-6■■□□□ 11.5
DROSHAQ9NRR4 UBTF-211ENST00000530828 721 ntTSL 518.56■□□□□ 0.565e-6■■□□□ 11.5
DROSHAQ9NRR4 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.285e-6■■□□□ 11.5
DROSHAQ9NRR4 DNMT3A-204ENST00000380756 4477 ntTSL 1 (best)16.16■□□□□ 0.185e-6■■□□□ 11.5
DROSHAQ9NRR4 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.035e-6■■□□□ 11.5
DROSHAQ9NRR4 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.713e-6■■□□□ 11.4
DROSHAQ9NRR4 TCF7L2-223ENST00000629706 1755 ntTSL 1 (best) BASIC17.68■□□□□ 0.425e-9■■□□□ 11.4
DROSHAQ9NRR4 TCF7L2-213ENST00000471569 330 ntTSL 516.33■□□□□ 0.25e-9■■□□□ 11.4
DROSHAQ9NRR4 TCF7L2-211ENST00000466338 1026 ntTSL 215.85■□□□□ 0.135e-9■■□□□ 11.4
DROSHAQ9NRR4 TCF7L2-212ENST00000470254 768 ntTSL 514.87□□□□□ -0.035e-9■■□□□ 11.4
DROSHAQ9NRR4 TCF7L2-205ENST00000355717 1979 ntTSL 1 (best) BASIC13.86□□□□□ -0.195e-9■■□□□ 11.4
DROSHAQ9NRR4 TCF7L2-204ENST00000352065 1553 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.225e-9■■□□□ 11.4
DROSHAQ9NRR4 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC12.82□□□□□ -0.365e-9■■□□□ 11.4
DROSHAQ9NRR4 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC12.2□□□□□ -0.465e-9■■□□□ 11.4
DROSHAQ9NRR4 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC12.09□□□□□ -0.475e-9■■□□□ 11.4
DROSHAQ9NRR4 TCF7L2-207ENST00000369386 1274 ntTSL 510.93□□□□□ -0.665e-9■■□□□ 11.4
DROSHAQ9NRR4 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC9.78□□□□□ -0.845e-9■■□□□ 11.4
DROSHAQ9NRR4 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.885e-9■■□□□ 11.4
DROSHAQ9NRR4 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC8.96□□□□□ -0.975e-9■■□□□ 11.4
DROSHAQ9NRR4 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC8.83□□□□□ -15e-9■■□□□ 11.4
DROSHAQ9NRR4 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC8.51□□□□□ -1.055e-9■■□□□ 11.4
DROSHAQ9NRR4 TCF7L2-201ENST00000277945 620 ntTSL 58.39□□□□□ -1.075e-9■■□□□ 11.4
DROSHAQ9NRR4 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC7.47□□□□□ -1.215e-9■■□□□ 11.4
DROSHAQ9NRR4 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.8□□□□□ -1.325e-9■■□□□ 11.4
DROSHAQ9NRR4 TCF7L2-214ENST00000480888 182 ntTSL 50.3□□□□□ -2.365e-9■■□□□ 11.4
Retrieved 100 of 16,331 protein–RNA pairs in 73.7 ms