Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
POLE3Q9NRF9 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
POLE3Q9NRF9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
POLE3Q9NRF9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 AL391807.1-203ENST00000604392 2365 ntBASIC16.7■□□□□ 0.26
POLE3Q9NRF9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 AC018470.1-201ENST00000624790 3129 ntBASIC16.7■□□□□ 0.26
POLE3Q9NRF9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
POLE3Q9NRF9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 FAM8A6P-201ENST00000407496 1135 ntBASIC16.69■□□□□ 0.26
POLE3Q9NRF9 HLA-F-220ENST00000434407 884 ntBASIC16.69■□□□□ 0.26
POLE3Q9NRF9 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 HOMER2P1-201ENST00000455653 964 ntBASIC16.69■□□□□ 0.26
POLE3Q9NRF9 YBX1P2-201ENST00000489612 999 ntBASIC16.69■□□□□ 0.26
POLE3Q9NRF9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 LINC01023-201ENST00000606054 436 ntBASIC16.69■□□□□ 0.26
POLE3Q9NRF9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 AC011558.1-201ENST00000623459 338 ntBASIC16.69■□□□□ 0.26
POLE3Q9NRF9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLE3Q9NRF9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms