Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 KRT18P65-201ENST00000439811 1286 ntBASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 AC002347.1-201ENST00000569543 541 ntBASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM7Q9NR12 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
PDLIM7Q9NR12 AC104581.1-202ENST00000635932 2618 ntBASIC20.02■□□□□ 0.79
PDLIM7Q9NR12 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDLIM7Q9NR12 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDLIM7Q9NR12 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.02■□□□□ 0.79
PDLIM7Q9NR12 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
PDLIM7Q9NR12 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDLIM7Q9NR12 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PDLIM7Q9NR12 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 AC007967.2-201ENST00000432613 625 ntBASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.01■□□□□ 0.79
PDLIM7Q9NR12 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM7Q9NR12 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM7Q9NR12 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
PDLIM7Q9NR12 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
PDLIM7Q9NR12 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDLIM7Q9NR12 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM7Q9NR12 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDLIM7Q9NR12 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM7Q9NR12 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20■□□□□ 0.79
PDLIM7Q9NR12 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
PDLIM7Q9NR12 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDLIM7Q9NR12 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20■□□□□ 0.79
PDLIM7Q9NR12 AC105339.3-201ENST00000560043 636 ntBASIC20■□□□□ 0.79
PDLIM7Q9NR12 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20■□□□□ 0.79
PDLIM7Q9NR12 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDLIM7Q9NR12 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20■□□□□ 0.79
PDLIM7Q9NR12 AL139288.1-201ENST00000623748 933 ntBASIC20■□□□□ 0.79
PDLIM7Q9NR12 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20■□□□□ 0.79
PDLIM7Q9NR12 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20■□□□□ 0.79
PDLIM7Q9NR12 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
PDLIM7Q9NR12 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDLIM7Q9NR12 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM7Q9NR12 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM7Q9NR12 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM7Q9NR12 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20■□□□□ 0.79
PDLIM7Q9NR12 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM7Q9NR12 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM7Q9NR12 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM7Q9NR12 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20■□□□□ 0.79
PDLIM7Q9NR12 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDLIM7Q9NR12 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM7Q9NR12 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20■□□□□ 0.79
PDLIM7Q9NR12 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PDLIM7Q9NR12 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 AP002414.3-201ENST00000589352 1468 ntBASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 AL096828.2-201ENST00000567259 1965 ntBASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 297.3 ms