Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMMDC1Q9NPL8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TIMMDC1Q9NPL8 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMMDC1Q9NPL8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.31■□□□□ 0.36
TIMMDC1Q9NPL8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TIMMDC1Q9NPL8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.31■□□□□ 0.36
TIMMDC1Q9NPL8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMMDC1Q9NPL8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TIMMDC1Q9NPL8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMMDC1Q9NPL8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMMDC1Q9NPL8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.31■□□□□ 0.36
TIMMDC1Q9NPL8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.31■□□□□ 0.36
TIMMDC1Q9NPL8 NEK4P2-201ENST00000580004 1012 ntBASIC17.31■□□□□ 0.36
TIMMDC1Q9NPL8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.31■□□□□ 0.36
TIMMDC1Q9NPL8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
TIMMDC1Q9NPL8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TIMMDC1Q9NPL8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMMDC1Q9NPL8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.31■□□□□ 0.36
TIMMDC1Q9NPL8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.31■□□□□ 0.36
TIMMDC1Q9NPL8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.31■□□□□ 0.36
TIMMDC1Q9NPL8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMMDC1Q9NPL8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TIMMDC1Q9NPL8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 KRT8P3-201ENST00000519669 1449 ntBASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 AC009947.2-201ENST00000444014 672 ntBASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 AC011558.1-201ENST00000623459 338 ntBASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TIMMDC1Q9NPL8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 FAM8A6P-201ENST00000407496 1135 ntBASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 HOMER2P1-201ENST00000455653 964 ntBASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 AC008622.2-201ENST00000617006 1229 ntBASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 AL023973.1-201ENST00000624619 620 ntBASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.29■□□□□ 0.36
TIMMDC1Q9NPL8 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms