Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 NUS1P2-201ENST00000417358 873 ntBASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 TSPY19P-201ENST00000418461 509 ntBASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 TSPY18P-201ENST00000441642 509 ntBASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VAT1LQ9HCJ6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 KRT18P31-201ENST00000506277 1292 ntBASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 AL121772.3-201ENST00000610840 674 ntBASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VAT1LQ9HCJ6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 AP000997.3-201ENST00000623333 2250 ntBASIC20.78■□□□□ 0.92
VAT1LQ9HCJ6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VAT1LQ9HCJ6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VAT1LQ9HCJ6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VAT1LQ9HCJ6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VAT1LQ9HCJ6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VAT1LQ9HCJ6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
VAT1LQ9HCJ6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.77■□□□□ 0.92
VAT1LQ9HCJ6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.77■□□□□ 0.92
VAT1LQ9HCJ6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
VAT1LQ9HCJ6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.77■□□□□ 0.92
VAT1LQ9HCJ6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.77■□□□□ 0.92
VAT1LQ9HCJ6 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.77■□□□□ 0.92
VAT1LQ9HCJ6 BNIP3P18-201ENST00000593976 575 ntBASIC20.77■□□□□ 0.92
VAT1LQ9HCJ6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.77■□□□□ 0.92
VAT1LQ9HCJ6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.77■□□□□ 0.92
VAT1LQ9HCJ6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VAT1LQ9HCJ6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms