Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 KRT8P7-201ENST00000533003 1432 ntBASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 Z83836.1-201ENST00000624605 1642 ntBASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 AP002469.2-201ENST00000531724 424 ntBASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.79■□□□□ 0.44
POLR1BQ9H9Y6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 AC079776.4-201ENST00000511039 504 ntBASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 SLC25A6P4-201ENST00000586535 553 ntBASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 FP475955.4-201ENST00000623131 1990 ntBASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
POLR1BQ9H9Y6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms