Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.17■□□□□ 0.82
BCAS3Q9H6U6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.17■□□□□ 0.82
BCAS3Q9H6U6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BCAS3Q9H6U6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BCAS3Q9H6U6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BCAS3Q9H6U6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
BCAS3Q9H6U6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.17■□□□□ 0.82
BCAS3Q9H6U6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BCAS3Q9H6U6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.17■□□□□ 0.82
BCAS3Q9H6U6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 FGFR3P6-201ENST00000457012 610 ntBASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 AC009533.2-201ENST00000543664 586 ntBASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 AL049840.3-201ENST00000602669 611 ntBASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 KRT8P47-201ENST00000604727 1398 ntBASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 AL354751.1-201ENST00000412768 1863 ntBASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.16■□□□□ 0.82
BCAS3Q9H6U6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 HNRNPDP1-201ENST00000439535 754 ntBASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 MTDHP3-201ENST00000594186 672 ntBASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 AL096828.2-201ENST00000567259 1965 ntBASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 REXO1L9P-201ENST00000604264 2108 ntBASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BCAS3Q9H6U6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
BCAS3Q9H6U6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
BCAS3Q9H6U6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
BCAS3Q9H6U6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.14■□□□□ 0.82
BCAS3Q9H6U6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
BCAS3Q9H6U6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
BCAS3Q9H6U6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
BCAS3Q9H6U6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.14■□□□□ 0.81
BCAS3Q9H6U6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BCAS3Q9H6U6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.14■□□□□ 0.81
BCAS3Q9H6U6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
BCAS3Q9H6U6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BCAS3Q9H6U6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BCAS3Q9H6U6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BCAS3Q9H6U6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BCAS3Q9H6U6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BCAS3Q9H6U6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BCAS3Q9H6U6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.14■□□□□ 0.81
BCAS3Q9H6U6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.14■□□□□ 0.81
BCAS3Q9H6U6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
BCAS3Q9H6U6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.14■□□□□ 0.81
BCAS3Q9H6U6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.14■□□□□ 0.81
BCAS3Q9H6U6 AL355877.3-201ENST00000622820 899 ntBASIC20.14■□□□□ 0.81
BCAS3Q9H6U6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
BCAS3Q9H6U6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BCAS3Q9H6U6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms