Protein–RNA interactions for Protein: Q9H4D0

CLSTN2, Calsyntenin-2, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN2Q9H4D0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 AC022898.2-201ENST00000616822 1312 ntBASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 AC026471.5-201ENST00000615068 467 ntBASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.29■□□□□ 0.84
CLSTN2Q9H4D0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 REXO1L11P-201ENST00000620964 1927 ntBASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLSTN2Q9H4D0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 SEC1P-202ENST00000473944 940 ntBASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 BX088651.1-201ENST00000540551 451 ntBASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 AP001412.1-201ENST00000608405 714 ntBASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN2Q9H4D0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLSTN2Q9H4D0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.27■□□□□ 0.83
CLSTN2Q9H4D0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.27■□□□□ 0.83
CLSTN2Q9H4D0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLSTN2Q9H4D0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLSTN2Q9H4D0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.27■□□□□ 0.83
CLSTN2Q9H4D0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLSTN2Q9H4D0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.26■□□□□ 0.83
CLSTN2Q9H4D0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLSTN2Q9H4D0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CLSTN2Q9H4D0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CLSTN2Q9H4D0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLSTN2Q9H4D0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CLSTN2Q9H4D0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms