Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 FLJ13224-201ENST00000313737 1514 ntBASIC16.66■□□□□ 0.26
UBQLN3Q9H347 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 KRT89P-201ENST00000620027 1478 ntBASIC16.66■□□□□ 0.26
UBQLN3Q9H347 AC009102.3-201ENST00000623118 1491 ntBASIC16.66■□□□□ 0.26
UBQLN3Q9H347 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
UBQLN3Q9H347 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 AC020916.1-201ENST00000587762 1774 ntBASIC16.65■□□□□ 0.26
UBQLN3Q9H347 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 RNF126P1-202ENST00000569893 925 ntBASIC16.65■□□□□ 0.26
UBQLN3Q9H347 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 SDHAP2-201ENST00000455183 2001 ntBASIC16.65■□□□□ 0.26
UBQLN3Q9H347 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN3Q9H347 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
UBQLN3Q9H347 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
UBQLN3Q9H347 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 ATP5G2P1-201ENST00000433580 426 ntBASIC16.64■□□□□ 0.25
UBQLN3Q9H347 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 AC024563.2-201ENST00000603282 481 ntBASIC16.64■□□□□ 0.25
UBQLN3Q9H347 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 390.6 ms