Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
VPS11Q9H270 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
VPS11Q9H270 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
VPS11Q9H270 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS11Q9H270 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS11Q9H270 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VPS11Q9H270 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
VPS11Q9H270 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS11Q9H270 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
VPS11Q9H270 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.1■□□□□ 0.49
VPS11Q9H270 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS11Q9H270 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS11Q9H270 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS11Q9H270 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
VPS11Q9H270 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VPS11Q9H270 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.1■□□□□ 0.49
VPS11Q9H270 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VPS11Q9H270 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.1■□□□□ 0.49
VPS11Q9H270 CR769767.2-201ENST00000622735 460 ntBASIC18.1■□□□□ 0.49
VPS11Q9H270 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
VPS11Q9H270 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.1■□□□□ 0.49
VPS11Q9H270 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS11Q9H270 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
VPS11Q9H270 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS11Q9H270 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS11Q9H270 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS11Q9H270 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
VPS11Q9H270 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
VPS11Q9H270 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.09■□□□□ 0.49
VPS11Q9H270 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.09■□□□□ 0.49
VPS11Q9H270 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VPS11Q9H270 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS11Q9H270 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VPS11Q9H270 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS11Q9H270 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS11Q9H270 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS11Q9H270 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VPS11Q9H270 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS11Q9H270 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS11Q9H270 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.09■□□□□ 0.49
VPS11Q9H270 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS11Q9H270 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VPS11Q9H270 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VPS11Q9H270 AP005242.2-201ENST00000580065 1175 ntBASIC18.09■□□□□ 0.49
VPS11Q9H270 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VPS11Q9H270 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS11Q9H270 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
VPS11Q9H270 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS11Q9H270 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
VPS11Q9H270 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
VPS11Q9H270 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
VPS11Q9H270 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS11Q9H270 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.09■□□□□ 0.49
VPS11Q9H270 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS11Q9H270 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.09■□□□□ 0.49
VPS11Q9H270 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS11Q9H270 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS11Q9H270 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.09■□□□□ 0.49
VPS11Q9H270 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.09■□□□□ 0.49
VPS11Q9H270 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS11Q9H270 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
VPS11Q9H270 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VPS11Q9H270 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.08■□□□□ 0.49
VPS11Q9H270 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VPS11Q9H270 KRT8P7-201ENST00000533003 1432 ntBASIC18.08■□□□□ 0.49
VPS11Q9H270 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VPS11Q9H270 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VPS11Q9H270 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VPS11Q9H270 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
VPS11Q9H270 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VPS11Q9H270 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.08■□□□□ 0.48
VPS11Q9H270 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.08■□□□□ 0.48
VPS11Q9H270 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VPS11Q9H270 GCSHP5-201ENST00000443090 522 ntBASIC18.08■□□□□ 0.48
VPS11Q9H270 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.08■□□□□ 0.48
VPS11Q9H270 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.08■□□□□ 0.48
VPS11Q9H270 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.08■□□□□ 0.48
VPS11Q9H270 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS11Q9H270 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.08■□□□□ 0.48
VPS11Q9H270 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.08■□□□□ 0.48
VPS11Q9H270 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
VPS11Q9H270 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VPS11Q9H270 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS11Q9H270 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VPS11Q9H270 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS11Q9H270 NKILA-202ENST00000614771 2598 ntBASIC18.08■□□□□ 0.48
VPS11Q9H270 AL121761.2-201ENST00000598007 1648 ntBASIC18.08■□□□□ 0.48
VPS11Q9H270 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS11Q9H270 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
VPS11Q9H270 OR6D1P-203ENST00000641209 4860 ntBASIC18.07■□□□□ 0.48
VPS11Q9H270 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS11Q9H270 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
VPS11Q9H270 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS11Q9H270 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS11Q9H270 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS11Q9H270 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS11Q9H270 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS11Q9H270 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS11Q9H270 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.07■□□□□ 0.48
VPS11Q9H270 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms