Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RN7SKP143-201ENST00000410519 310 ntBASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AC009500.1-201ENST00000420684 583 ntBASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 BX470209.1-201ENST00000421297 916 ntTSL 3 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AC062020.1-201ENST00000435441 801 ntTSL 3 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AC006994.1-201ENST00000438212 839 ntBASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AL445567.1-201ENST00000439121 144 ntBASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 MGC32805-201ENST00000503529 579 ntTSL 3 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AC147055.1-201ENST00000509261 750 ntBASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 OR5H4P-201ENST00000510851 923 ntBASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AC046195.2-201ENST00000519652 541 ntTSL 4 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 HTATIP2-206ENST00000531058 1060 ntTSL 3 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AC087321.1-201ENST00000539105 460 ntTSL 3 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AC093012.1-202ENST00000549403 582 ntBASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AL137779.3-201ENST00000553295 729 ntBASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 RN7SL811P-201ENST00000580735 298 ntBASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 HSP90AB2P-202ENST00000602906 1277 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AC007349.4-201ENST00000608114 532 ntBASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 MIR7108-201ENST00000614319 87 ntBASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AC016542.2-201ENST00000624201 619 ntBASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AL157888.1-201ENST00000631930 593 ntBASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AL390726.6-203ENST00000636076 473 ntBASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 MTND4P12-201ENST00000498999 1377 ntBASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AC009169.1-201ENST00000563784 1377 ntBASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 SPATA7-201ENST00000045347 1410 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 APOL1-203ENST00000397279 1564 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 AC090877.2-201ENST00000558441 1738 ntBASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 LINC02012-201ENST00000608206 1725 ntBASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 TEX35-201ENST00000319416 1023 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 SERPINB3-202ENST00000332821 1541 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 SPACA9-201ENST00000350499 894 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 RNU6-906P-201ENST00000384700 70 ntBASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 RGS10-203ENST00000392865 852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 NUS1P4-201ENST00000401550 585 ntBASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 OR6C64P-201ENST00000419708 825 ntBASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 VN2R9P-201ENST00000431428 953 ntBASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 HAUS6P3-201ENST00000456660 1107 ntBASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 HNRNPA1P42-201ENST00000458678 957 ntBASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 RWDD1-204ENST00000487832 1427 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 AC139491.6-201ENST00000513919 735 ntTSL 3 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 CAPSL-204ENST00000514524 656 ntTSL 2 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 CCDC192-203ENST00000514853 1045 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 OR4B2P-201ENST00000527724 882 ntBASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms