Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
KRTAP4-3Q9BYR4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
KRTAP4-3Q9BYR4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
KRTAP4-3Q9BYR4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
KRTAP4-3Q9BYR4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
KRTAP4-3Q9BYR4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
KRTAP4-3Q9BYR4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC6.1□□□□□ -1.43
KRTAP4-3Q9BYR4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
KRTAP4-3Q9BYR4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
KRTAP4-3Q9BYR4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
KRTAP4-3Q9BYR4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
KRTAP4-3Q9BYR4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
KRTAP4-3Q9BYR4 AC010460.3-201ENST00000511359 1579 ntBASIC6.1□□□□□ -1.43
KRTAP4-3Q9BYR4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
KRTAP4-3Q9BYR4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC6.1□□□□□ -1.43
KRTAP4-3Q9BYR4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 AC125634.1-201ENST00000438758 1403 ntBASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 SIRPAP1-201ENST00000448467 1770 ntBASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 MIR940-201ENST00000401276 94 ntBASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 AL590627.1-203ENST00000421194 1026 ntBASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 FAAHP1-202ENST00000446499 1238 ntBASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 FGFR3P6-201ENST00000457012 610 ntBASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 AC112698.1-201ENST00000510299 916 ntBASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 AC012640.2-201ENST00000561606 901 ntBASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 MTDHP3-201ENST00000594186 672 ntBASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 AC114341.1-201ENST00000618070 349 ntBASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-3Q9BYR4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms