Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 FAM197Y8-203ENST00000450145 560 ntBASIC20.85■□□□□ 0.93
SLF1Q9BQI6 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 AC064862.7-201ENST00000604520 867 ntBASIC20.85■□□□□ 0.93
SLF1Q9BQI6 AC008608.2-201ENST00000606089 416 ntBASIC20.85■□□□□ 0.93
SLF1Q9BQI6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLF1Q9BQI6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 AC126763.1-201ENST00000552015 2118 ntBASIC20.84■□□□□ 0.93
SLF1Q9BQI6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 AL022342.1-201ENST00000400363 863 ntBASIC20.84■□□□□ 0.93
SLF1Q9BQI6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 AC112698.1-201ENST00000510299 916 ntBASIC20.84■□□□□ 0.93
SLF1Q9BQI6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 LETM1P2-201ENST00000597330 2178 ntBASIC20.84■□□□□ 0.93
SLF1Q9BQI6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 INTS4P1-201ENST00000438455 1935 ntBASIC20.84■□□□□ 0.93
SLF1Q9BQI6 WIZP1-201ENST00000531444 2299 ntBASIC20.84■□□□□ 0.93
SLF1Q9BQI6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF1Q9BQI6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLF1Q9BQI6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SLF1Q9BQI6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLF1Q9BQI6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SLF1Q9BQI6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SLF1Q9BQI6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLF1Q9BQI6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLF1Q9BQI6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.83■□□□□ 0.93
SLF1Q9BQI6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.83■□□□□ 0.93
SLF1Q9BQI6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.83■□□□□ 0.93
SLF1Q9BQI6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.83■□□□□ 0.93
SLF1Q9BQI6 AC011467.2-201ENST00000598425 242 ntBASIC20.83■□□□□ 0.93
SLF1Q9BQI6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLF1Q9BQI6 AC018470.1-201ENST00000624790 3129 ntBASIC20.83■□□□□ 0.92
SLF1Q9BQI6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLF1Q9BQI6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLF1Q9BQI6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.83■□□□□ 0.92
SLF1Q9BQI6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.83■□□□□ 0.92
SLF1Q9BQI6 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.83■□□□□ 0.92
SLF1Q9BQI6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLF1Q9BQI6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SLF1Q9BQI6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLF1Q9BQI6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLF1Q9BQI6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms