Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 FAM220CP-201ENST00000395253 831 ntBASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 UNC93B7-201ENST00000509439 705 ntBASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP1Q96SZ6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 RCN1P2-201ENST00000398357 915 ntBASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 SAPCD2P3-201ENST00000455031 850 ntBASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 INTS4P1-201ENST00000438455 1935 ntBASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CDK5RAP1Q96SZ6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 REXO1L6P-202ENST00000619970 1078 ntBASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 FLJ13224-201ENST00000313737 1514 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms