Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 AC092364.2-202ENST00000597012 1073 ntBASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 KRT8P47-201ENST00000604727 1398 ntBASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
NECTIN4Q96NY8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NECTIN4Q96NY8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NECTIN4Q96NY8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NECTIN4Q96NY8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NECTIN4Q96NY8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NECTIN4Q96NY8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NECTIN4Q96NY8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NECTIN4Q96NY8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.52■□□□□ 0.56
NECTIN4Q96NY8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.52■□□□□ 0.56
NECTIN4Q96NY8 PRSS29P-201ENST00000440800 595 ntBASIC18.52■□□□□ 0.56
NECTIN4Q96NY8 VN2R19P-201ENST00000442399 1052 ntBASIC18.52■□□□□ 0.56
NECTIN4Q96NY8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
NECTIN4Q96NY8 AC004706.3-202ENST00000621574 984 ntBASIC18.52■□□□□ 0.56
NECTIN4Q96NY8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NECTIN4Q96NY8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NECTIN4Q96NY8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NECTIN4Q96NY8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
NECTIN4Q96NY8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.52■□□□□ 0.55
NECTIN4Q96NY8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.52■□□□□ 0.55
NECTIN4Q96NY8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.52■□□□□ 0.55
NECTIN4Q96NY8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.52■□□□□ 0.55
NECTIN4Q96NY8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.52■□□□□ 0.55
NECTIN4Q96NY8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NECTIN4Q96NY8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 AL158211.5-201ENST00000623583 2518 ntBASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 FAM8A3P-201ENST00000427218 844 ntBASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 MIR4751-201ENST00000578027 74 ntBASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 AL161938.1-201ENST00000569833 2180 ntBASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
NECTIN4Q96NY8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms