Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 RPS2P28-201ENST00000314255 741 ntBASIC20.9■□□□□ 0.94
CCDC17Q96LX7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC17Q96LX7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC17Q96LX7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC17Q96LX7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC17Q96LX7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC17Q96LX7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
CCDC17Q96LX7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC17Q96LX7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC17Q96LX7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CCDC17Q96LX7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC17Q96LX7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CCDC17Q96LX7 PMPCAP1-201ENST00000508114 1576 ntBASIC20.89■□□□□ 0.94
CCDC17Q96LX7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.89■□□□□ 0.94
CCDC17Q96LX7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.94
CCDC17Q96LX7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC17Q96LX7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC17Q96LX7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC17Q96LX7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CCDC17Q96LX7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC17Q96LX7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CCDC17Q96LX7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC17Q96LX7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC17Q96LX7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CCDC17Q96LX7 AL590627.1-203ENST00000421194 1026 ntBASIC20.89■□□□□ 0.93
CCDC17Q96LX7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC17Q96LX7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC17Q96LX7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC17Q96LX7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC17Q96LX7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC17Q96LX7 AC116407.2-201ENST00000613639 860 ntBASIC20.89■□□□□ 0.93
CCDC17Q96LX7 AD001527.2-201ENST00000622994 785 ntBASIC20.89■□□□□ 0.93
CCDC17Q96LX7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.89■□□□□ 0.93
CCDC17Q96LX7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC17Q96LX7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC17Q96LX7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC17Q96LX7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC17Q96LX7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC17Q96LX7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC17Q96LX7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 HNRNPDP1-201ENST00000439535 754 ntBASIC20.88■□□□□ 0.93
CCDC17Q96LX7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 AC090164.3-201ENST00000610780 2143 ntBASIC20.88■□□□□ 0.93
CCDC17Q96LX7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 FAM215A-202ENST00000632077 792 ntBASIC20.88■□□□□ 0.93
CCDC17Q96LX7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCDC17Q96LX7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC17Q96LX7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC17Q96LX7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC17Q96LX7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC17Q96LX7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC17Q96LX7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC17Q96LX7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC17Q96LX7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC17Q96LX7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC17Q96LX7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CCDC17Q96LX7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC17Q96LX7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC17Q96LX7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC17Q96LX7 AC120114.3-201ENST00000611923 658 ntBASIC20.87■□□□□ 0.93
CCDC17Q96LX7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC17Q96LX7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC17Q96LX7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC17Q96LX7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC17Q96LX7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC17Q96LX7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC17Q96LX7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC17Q96LX7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CCDC17Q96LX7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC17Q96LX7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC17Q96LX7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC17Q96LX7 IL9RP2-201ENST00000423948 1312 ntBASIC20.86■□□□□ 0.93
CCDC17Q96LX7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CCDC17Q96LX7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC17Q96LX7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms