Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA5Q96FF9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA5Q96FF9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CDCA5Q96FF9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA5Q96FF9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CDCA5Q96FF9 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.91■□□□□ 0.94
CDCA5Q96FF9 COX5BP2-201ENST00000392354 334 ntBASIC20.91■□□□□ 0.94
CDCA5Q96FF9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.91■□□□□ 0.94
CDCA5Q96FF9 MRPL20P1-201ENST00000400819 433 ntBASIC20.91■□□□□ 0.94
CDCA5Q96FF9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA5Q96FF9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA5Q96FF9 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.91■□□□□ 0.94
CDCA5Q96FF9 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.91■□□□□ 0.94
CDCA5Q96FF9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA5Q96FF9 AC096734.2-201ENST00000562054 433 ntBASIC20.91■□□□□ 0.94
CDCA5Q96FF9 AC004449.1-201ENST00000564240 433 ntBASIC20.91■□□□□ 0.94
CDCA5Q96FF9 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.91■□□□□ 0.94
CDCA5Q96FF9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.91■□□□□ 0.94
CDCA5Q96FF9 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.91■□□□□ 0.94
CDCA5Q96FF9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.91■□□□□ 0.94
CDCA5Q96FF9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 ACTG1P14-201ENST00000446382 1122 ntBASIC20.9■□□□□ 0.94
CDCA5Q96FF9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
CDCA5Q96FF9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CDCA5Q96FF9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CDCA5Q96FF9 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CDCA5Q96FF9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDCA5Q96FF9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CDCA5Q96FF9 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDCA5Q96FF9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDCA5Q96FF9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDCA5Q96FF9 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.89■□□□□ 0.93
CDCA5Q96FF9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDCA5Q96FF9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.89■□□□□ 0.93
CDCA5Q96FF9 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDCA5Q96FF9 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.89■□□□□ 0.93
CDCA5Q96FF9 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.89■□□□□ 0.93
CDCA5Q96FF9 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CDCA5Q96FF9 AL805961.1-202ENST00000641562 540 ntBASIC20.89■□□□□ 0.93
CDCA5Q96FF9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CDCA5Q96FF9 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDCA5Q96FF9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDCA5Q96FF9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDCA5Q96FF9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDCA5Q96FF9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDCA5Q96FF9 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.89■□□□□ 0.93
CDCA5Q96FF9 GMCL1P1-201ENST00000463439 1581 ntBASIC20.89■□□□□ 0.93
CDCA5Q96FF9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDCA5Q96FF9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CDCA5Q96FF9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA5Q96FF9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA5Q96FF9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CDCA5Q96FF9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA5Q96FF9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA5Q96FF9 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA5Q96FF9 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA5Q96FF9 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA5Q96FF9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA5Q96FF9 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA5Q96FF9 AC092474.2-201ENST00000424288 719 ntBASIC20.88■□□□□ 0.93
CDCA5Q96FF9 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.88■□□□□ 0.93
CDCA5Q96FF9 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.88■□□□□ 0.93
CDCA5Q96FF9 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.88■□□□□ 0.93
CDCA5Q96FF9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.88■□□□□ 0.93
CDCA5Q96FF9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.88■□□□□ 0.93
CDCA5Q96FF9 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CDCA5Q96FF9 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CDCA5Q96FF9 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.88■□□□□ 0.93
CDCA5Q96FF9 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms