Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 AC004817.3-201ENST00000602957 2129 ntBASIC13.93□□□□□ -0.18
LINC01006Q8NI28 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 SIGLEC16-201ENST00000599858 1437 ntBASIC13.92□□□□□ -0.18
LINC01006Q8NI28 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.92□□□□□ -0.18
LINC01006Q8NI28 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 AL139424.1-201ENST00000607572 797 ntBASIC13.92□□□□□ -0.18
LINC01006Q8NI28 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.92□□□□□ -0.18
LINC01006Q8NI28 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
LINC01006Q8NI28 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 AC022898.2-201ENST00000616822 1312 ntBASIC13.91□□□□□ -0.18
LINC01006Q8NI28 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 SPDYE21P-201ENST00000413323 827 ntBASIC13.91□□□□□ -0.18
LINC01006Q8NI28 KRT18P27-201ENST00000427733 1299 ntBASIC13.91□□□□□ -0.18
LINC01006Q8NI28 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 AC112482.1-201ENST00000492080 688 ntBASIC13.91□□□□□ -0.18
LINC01006Q8NI28 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 KRT8P47-201ENST00000604727 1398 ntBASIC13.91□□□□□ -0.18
LINC01006Q8NI28 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 PHGDH-209ENST00000641074 1780 ntBASIC13.91□□□□□ -0.18
LINC01006Q8NI28 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01006Q8NI28 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 AC093010.1-201ENST00000473625 1624 ntBASIC13.9□□□□□ -0.18
LINC01006Q8NI28 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms