Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PHTF2Q8N3S3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PHTF2Q8N3S3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.58■□□□□ 0.57
PHTF2Q8N3S3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.58■□□□□ 0.57
PHTF2Q8N3S3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PHTF2Q8N3S3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PHTF2Q8N3S3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PHTF2Q8N3S3 AL499627.1-201ENST00000569373 2188 ntBASIC18.58■□□□□ 0.57
PHTF2Q8N3S3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.58■□□□□ 0.57
PHTF2Q8N3S3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.58■□□□□ 0.57
PHTF2Q8N3S3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PHTF2Q8N3S3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.58■□□□□ 0.57
PHTF2Q8N3S3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.58■□□□□ 0.57
PHTF2Q8N3S3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PHTF2Q8N3S3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PHTF2Q8N3S3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 SAPCD2P3-201ENST00000455031 850 ntBASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 AF238378.1-201ENST00000526806 358 ntBASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 AC008687.5-201ENST00000593746 558 ntBASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PHTF2Q8N3S3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 POM121L3P-201ENST00000419331 1163 ntBASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 MINOS1P3-201ENST00000457048 203 ntBASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 AC005336.2-201ENST00000593183 939 ntBASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.57■□□□□ 0.56
PHTF2Q8N3S3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 AC067852.2-201ENST00000590513 2313 ntBASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHTF2Q8N3S3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHTF2Q8N3S3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PHTF2Q8N3S3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PHTF2Q8N3S3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.55■□□□□ 0.56
PHTF2Q8N3S3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHTF2Q8N3S3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHTF2Q8N3S3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHTF2Q8N3S3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHTF2Q8N3S3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHTF2Q8N3S3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.55■□□□□ 0.56
PHTF2Q8N3S3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHTF2Q8N3S3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms