Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
ARHGEF28Q8N1W1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC24.73■■□□□ 1.55
ARHGEF28Q8N1W1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ARHGEF28Q8N1W1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC24.73■■□□□ 1.55
ARHGEF28Q8N1W1 BX276092.7-203ENST00000637198 1536 ntBASIC24.72■■□□□ 1.55
ARHGEF28Q8N1W1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ARHGEF28Q8N1W1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
ARHGEF28Q8N1W1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ARHGEF28Q8N1W1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
ARHGEF28Q8N1W1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ARHGEF28Q8N1W1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ARHGEF28Q8N1W1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ARHGEF28Q8N1W1 AC006504.4-201ENST00000592118 1568 ntBASIC24.72■■□□□ 1.55
ARHGEF28Q8N1W1 PC-208ENST00000529047 1607 ntTSL 3 BASIC24.72■■□□□ 1.55
ARHGEF28Q8N1W1 AC003669.1-201ENST00000334569 611 ntBASIC24.72■■□□□ 1.55
ARHGEF28Q8N1W1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
ARHGEF28Q8N1W1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ARHGEF28Q8N1W1 RPSAP43-201ENST00000402237 625 ntBASIC24.72■■□□□ 1.55
ARHGEF28Q8N1W1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC24.72■■□□□ 1.55
ARHGEF28Q8N1W1 PRYP5-201ENST00000451909 266 ntBASIC24.72■■□□□ 1.55
ARHGEF28Q8N1W1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC24.72■■□□□ 1.55
ARHGEF28Q8N1W1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
ARHGEF28Q8N1W1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ARHGEF28Q8N1W1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ARHGEF28Q8N1W1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC24.72■■□□□ 1.55
ARHGEF28Q8N1W1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
ARHGEF28Q8N1W1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ARHGEF28Q8N1W1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC24.71■■□□□ 1.55
ARHGEF28Q8N1W1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC24.71■■□□□ 1.55
ARHGEF28Q8N1W1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ARHGEF28Q8N1W1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ARHGEF28Q8N1W1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC24.71■■□□□ 1.55
ARHGEF28Q8N1W1 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC24.71■■□□□ 1.55
ARHGEF28Q8N1W1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ARHGEF28Q8N1W1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
ARHGEF28Q8N1W1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ARHGEF28Q8N1W1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC24.71■■□□□ 1.55
ARHGEF28Q8N1W1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC24.7■■□□□ 1.55
ARHGEF28Q8N1W1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
ARHGEF28Q8N1W1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC24.7■■□□□ 1.55
ARHGEF28Q8N1W1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC24.7■■□□□ 1.55
ARHGEF28Q8N1W1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC24.7■■□□□ 1.54
ARHGEF28Q8N1W1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC24.7■■□□□ 1.54
ARHGEF28Q8N1W1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC24.7■■□□□ 1.54
ARHGEF28Q8N1W1 AL020989.1-201ENST00000422979 469 ntBASIC24.7■■□□□ 1.54
ARHGEF28Q8N1W1 KRT18P3-201ENST00000451602 1288 ntBASIC24.7■■□□□ 1.54
ARHGEF28Q8N1W1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC24.7■■□□□ 1.54
ARHGEF28Q8N1W1 AC109462.3-201ENST00000573934 613 ntBASIC24.7■■□□□ 1.54
ARHGEF28Q8N1W1 AC055717.3-201ENST00000622967 595 ntBASIC24.7■■□□□ 1.54
ARHGEF28Q8N1W1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC24.7■■□□□ 1.54
ARHGEF28Q8N1W1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC24.7■■□□□ 1.54
ARHGEF28Q8N1W1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC24.7■■□□□ 1.54
ARHGEF28Q8N1W1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC24.7■■□□□ 1.54
ARHGEF28Q8N1W1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ARHGEF28Q8N1W1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ARHGEF28Q8N1W1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
ARHGEF28Q8N1W1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
ARHGEF28Q8N1W1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC24.7■■□□□ 1.54
ARHGEF28Q8N1W1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 COX5BP2-201ENST00000392354 334 ntBASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 MIR940-201ENST00000401276 94 ntBASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 UPF3AP3-201ENST00000420996 769 ntBASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 RNA5SP416-201ENST00000516838 111 ntBASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 AC064836.3-201ENST00000607928 673 ntBASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 AL805961.1-202ENST00000641562 540 ntBASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 AC018445.3-201ENST00000624177 1945 ntBASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 AL589182.2-201ENST00000619332 1049 ntBASIC24.69■■□□□ 1.54
ARHGEF28Q8N1W1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ARHGEF28Q8N1W1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC24.68■■□□□ 1.54
ARHGEF28Q8N1W1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC24.68■■□□□ 1.54
ARHGEF28Q8N1W1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ARHGEF28Q8N1W1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
ARHGEF28Q8N1W1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
ARHGEF28Q8N1W1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ARHGEF28Q8N1W1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC24.68■■□□□ 1.54
ARHGEF28Q8N1W1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC24.68■■□□□ 1.54
ARHGEF28Q8N1W1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms