Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 AL031598.1-201ENST00000561511 1773 ntBASIC19.48■□□□□ 0.71
VPS52Q8N1B4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 MIR149-201ENST00000384879 89 ntBASIC19.48■□□□□ 0.71
VPS52Q8N1B4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 MIR5100-201ENST00000579544 119 ntBASIC19.48■□□□□ 0.71
VPS52Q8N1B4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
VPS52Q8N1B4 AC099343.3-201ENST00000605834 2503 ntBASIC19.48■□□□□ 0.71
VPS52Q8N1B4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS52Q8N1B4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS52Q8N1B4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS52Q8N1B4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS52Q8N1B4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
VPS52Q8N1B4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS52Q8N1B4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
VPS52Q8N1B4 FAM197Y8-203ENST00000450145 560 ntBASIC19.47■□□□□ 0.71
VPS52Q8N1B4 AC096582.2-201ENST00000510860 516 ntBASIC19.47■□□□□ 0.71
VPS52Q8N1B4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
VPS52Q8N1B4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.47■□□□□ 0.71
VPS52Q8N1B4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.47■□□□□ 0.71
VPS52Q8N1B4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.47■□□□□ 0.71
VPS52Q8N1B4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.47■□□□□ 0.71
VPS52Q8N1B4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VPS52Q8N1B4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.47■□□□□ 0.71
VPS52Q8N1B4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS52Q8N1B4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
VPS52Q8N1B4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
VPS52Q8N1B4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS52Q8N1B4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS52Q8N1B4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS52Q8N1B4 HTR7P1-202ENST00000624664 4411 ntBASIC19.47■□□□□ 0.71
VPS52Q8N1B4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS52Q8N1B4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 AP001005.1-201ENST00000571755 1248 ntBASIC19.46■□□□□ 0.71
VPS52Q8N1B4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 AC006538.3-201ENST00000612495 578 ntBASIC19.46■□□□□ 0.71
VPS52Q8N1B4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS52Q8N1B4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 AC113404.2-201ENST00000507884 177 ntBASIC19.45■□□□□ 0.7
VPS52Q8N1B4 AC008687.5-201ENST00000593746 558 ntBASIC19.45■□□□□ 0.7
VPS52Q8N1B4 AL773604.1-201ENST00000617417 272 ntBASIC19.45■□□□□ 0.7
VPS52Q8N1B4 AC114341.1-201ENST00000618070 349 ntBASIC19.45■□□□□ 0.7
VPS52Q8N1B4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.45■□□□□ 0.7
VPS52Q8N1B4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms