Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 PON3-205ENST00000451904 1053 ntTSL 3 BASIC26.43■■□□□ 1.82
ABCA6Q8N139 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
ABCA6Q8N139 AL390955.2-201ENST00000603032 514 ntBASIC26.43■■□□□ 1.82
ABCA6Q8N139 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
ABCA6Q8N139 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC26.42■■□□□ 1.82
ABCA6Q8N139 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
ABCA6Q8N139 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
ABCA6Q8N139 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ABCA6Q8N139 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC26.42■■□□□ 1.82
ABCA6Q8N139 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC26.42■■□□□ 1.82
ABCA6Q8N139 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
ABCA6Q8N139 AC003669.1-201ENST00000334569 611 ntBASIC26.42■■□□□ 1.82
ABCA6Q8N139 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ABCA6Q8N139 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
ABCA6Q8N139 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC26.42■■□□□ 1.82
ABCA6Q8N139 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC26.42■■□□□ 1.82
ABCA6Q8N139 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ABCA6Q8N139 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC26.42■■□□□ 1.82
ABCA6Q8N139 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC26.42■■□□□ 1.82
ABCA6Q8N139 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC26.42■■□□□ 1.82
ABCA6Q8N139 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC26.42■■□□□ 1.82
ABCA6Q8N139 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
ABCA6Q8N139 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ABCA6Q8N139 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC26.42■■□□□ 1.82
ABCA6Q8N139 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
ABCA6Q8N139 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ABCA6Q8N139 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
ABCA6Q8N139 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ABCA6Q8N139 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
ABCA6Q8N139 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ABCA6Q8N139 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ABCA6Q8N139 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC26.41■■□□□ 1.82
ABCA6Q8N139 ACTG1P14-201ENST00000446382 1122 ntBASIC26.41■■□□□ 1.82
ABCA6Q8N139 SMN2-210ENST00000511812 867 ntTSL 2 BASIC26.41■■□□□ 1.82
ABCA6Q8N139 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
ABCA6Q8N139 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC26.41■■□□□ 1.82
ABCA6Q8N139 AC096734.2-201ENST00000562054 433 ntBASIC26.41■■□□□ 1.82
ABCA6Q8N139 AL049757.1-201ENST00000616842 1596 ntBASIC26.41■■□□□ 1.82
ABCA6Q8N139 AC009093.7-201ENST00000623853 1223 ntBASIC26.41■■□□□ 1.82
ABCA6Q8N139 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC26.4■■□□□ 1.82
ABCA6Q8N139 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ABCA6Q8N139 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ABCA6Q8N139 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
ABCA6Q8N139 NKTR-203ENST00000442970 646 ntTSL 2 BASIC26.4■■□□□ 1.82
ABCA6Q8N139 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC26.4■■□□□ 1.82
ABCA6Q8N139 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC26.4■■□□□ 1.82
ABCA6Q8N139 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
ABCA6Q8N139 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
ABCA6Q8N139 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ABCA6Q8N139 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
ABCA6Q8N139 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ABCA6Q8N139 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ABCA6Q8N139 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC26.4■■□□□ 1.82
ABCA6Q8N139 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC26.4■■□□□ 1.82
ABCA6Q8N139 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ABCA6Q8N139 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
ABCA6Q8N139 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
ABCA6Q8N139 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
ABCA6Q8N139 CD99-202ENST00000381180 530 ntTSL 2 BASIC26.39■■□□□ 1.82
ABCA6Q8N139 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC26.39■■□□□ 1.82
ABCA6Q8N139 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ABCA6Q8N139 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC26.39■■□□□ 1.82
ABCA6Q8N139 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
ABCA6Q8N139 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ABCA6Q8N139 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
ABCA6Q8N139 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ABCA6Q8N139 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
ABCA6Q8N139 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC26.39■■□□□ 1.82
ABCA6Q8N139 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
ABCA6Q8N139 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC26.39■■□□□ 1.82
ABCA6Q8N139 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC26.39■■□□□ 1.81
ABCA6Q8N139 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
ABCA6Q8N139 HLA-J-202ENST00000469281 1241 ntBASIC26.39■■□□□ 1.81
ABCA6Q8N139 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC26.39■■□□□ 1.81
ABCA6Q8N139 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC26.39■■□□□ 1.81
ABCA6Q8N139 GMCL1P1-201ENST00000463439 1581 ntBASIC26.38■■□□□ 1.81
ABCA6Q8N139 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
ABCA6Q8N139 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
ABCA6Q8N139 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
ABCA6Q8N139 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
ABCA6Q8N139 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ABCA6Q8N139 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
ABCA6Q8N139 AP002414.1-201ENST00000391405 1147 ntBASIC26.38■■□□□ 1.81
ABCA6Q8N139 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
ABCA6Q8N139 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC26.38■■□□□ 1.81
ABCA6Q8N139 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC26.38■■□□□ 1.81
ABCA6Q8N139 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC26.38■■□□□ 1.81
ABCA6Q8N139 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ABCA6Q8N139 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC26.37■■□□□ 1.81
ABCA6Q8N139 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ABCA6Q8N139 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ABCA6Q8N139 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC26.37■■□□□ 1.81
ABCA6Q8N139 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ABCA6Q8N139 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC26.37■■□□□ 1.81
ABCA6Q8N139 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC26.37■■□□□ 1.81
ABCA6Q8N139 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC26.37■■□□□ 1.81
ABCA6Q8N139 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC26.37■■□□□ 1.81
ABCA6Q8N139 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ABCA6Q8N139 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC26.37■■□□□ 1.81
ABCA6Q8N139 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC26.37■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms