Protein–RNA interactions for Protein: Q8N0V4

LGI2, Leucine-rich repeat LGI family member 2, humanhuman

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI2Q8N0V4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LGI2Q8N0V4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 DUTP2-201ENST00000519164 463 ntBASIC18.5■□□□□ 0.55
LGI2Q8N0V4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LGI2Q8N0V4 AC022898.2-201ENST00000616822 1312 ntBASIC18.49■□□□□ 0.55
LGI2Q8N0V4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LGI2Q8N0V4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LGI2Q8N0V4 HTR7P1-202ENST00000624664 4411 ntBASIC18.48■□□□□ 0.55
LGI2Q8N0V4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
LGI2Q8N0V4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LGI2Q8N0V4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
LGI2Q8N0V4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LGI2Q8N0V4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LGI2Q8N0V4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LGI2Q8N0V4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.48■□□□□ 0.55
LGI2Q8N0V4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LGI2Q8N0V4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LGI2Q8N0V4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LGI2Q8N0V4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.48■□□□□ 0.55
LGI2Q8N0V4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LGI2Q8N0V4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LGI2Q8N0V4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LGI2Q8N0V4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
LGI2Q8N0V4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LGI2Q8N0V4 NUS1P2-201ENST00000417358 873 ntBASIC18.48■□□□□ 0.55
LGI2Q8N0V4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.48■□□□□ 0.55
LGI2Q8N0V4 AL450487.1-201ENST00000426799 995 ntBASIC18.48■□□□□ 0.55
LGI2Q8N0V4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms