Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 AC006116.8-202ENST00000587620 1550 ntBASIC18.72■□□□□ 0.59
RFX6Q8HWS3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 DUTP2-201ENST00000519164 463 ntBASIC18.71■□□□□ 0.59
RFX6Q8HWS3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 AC005363.2-201ENST00000618631 242 ntBASIC18.71■□□□□ 0.59
RFX6Q8HWS3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFX6Q8HWS3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RFX6Q8HWS3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RFX6Q8HWS3 LINC00602-201ENST00000629776 2065 ntBASIC18.7■□□□□ 0.58
RFX6Q8HWS3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX6Q8HWS3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.7■□□□□ 0.58
RFX6Q8HWS3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX6Q8HWS3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFX6Q8HWS3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX6Q8HWS3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX6Q8HWS3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFX6Q8HWS3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.7■□□□□ 0.58
RFX6Q8HWS3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX6Q8HWS3 AL137013.1-201ENST00000432946 1228 ntBASIC18.7■□□□□ 0.58
RFX6Q8HWS3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.7■□□□□ 0.58
RFX6Q8HWS3 RASA4DP-201ENST00000460726 1199 ntBASIC18.7■□□□□ 0.58
RFX6Q8HWS3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
RFX6Q8HWS3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFX6Q8HWS3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.7■□□□□ 0.58
RFX6Q8HWS3 LINC00167-201ENST00000530583 1419 ntBASIC18.7■□□□□ 0.58
RFX6Q8HWS3 AL441883.1-201ENST00000566170 1045 ntBASIC18.7■□□□□ 0.58
RFX6Q8HWS3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX6Q8HWS3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX6Q8HWS3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.7■□□□□ 0.58
RFX6Q8HWS3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX6Q8HWS3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX6Q8HWS3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX6Q8HWS3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX6Q8HWS3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.69■□□□□ 0.58
RFX6Q8HWS3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX6Q8HWS3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RFX6Q8HWS3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RFX6Q8HWS3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RFX6Q8HWS3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFX6Q8HWS3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFX6Q8HWS3 AC113347.1-201ENST00000413321 391 ntBASIC18.69■□□□□ 0.58
RFX6Q8HWS3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFX6Q8HWS3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.69■□□□□ 0.58
RFX6Q8HWS3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX6Q8HWS3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX6Q8HWS3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX6Q8HWS3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
RFX6Q8HWS3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.69■□□□□ 0.58
RFX6Q8HWS3 AC100803.2-201ENST00000562459 1963 ntBASIC18.69■□□□□ 0.58
RFX6Q8HWS3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX6Q8HWS3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
RFX6Q8HWS3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RFX6Q8HWS3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.69■□□□□ 0.58
RFX6Q8HWS3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.69■□□□□ 0.58
RFX6Q8HWS3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.69■□□□□ 0.58
RFX6Q8HWS3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms