Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK2Q86Y07 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK2Q86Y07 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
VRK2Q86Y07 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VRK2Q86Y07 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.63■□□□□ 0.25
VRK2Q86Y07 AC034232.1-201ENST00000506026 1064 ntBASIC16.63■□□□□ 0.25
VRK2Q86Y07 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
VRK2Q86Y07 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.63■□□□□ 0.25
VRK2Q86Y07 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
VRK2Q86Y07 AL441883.1-201ENST00000566170 1045 ntBASIC16.63■□□□□ 0.25
VRK2Q86Y07 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
VRK2Q86Y07 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
VRK2Q86Y07 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK2Q86Y07 AC079602.3-201ENST00000623931 403 ntBASIC16.63■□□□□ 0.25
VRK2Q86Y07 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.63■□□□□ 0.25
VRK2Q86Y07 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK2Q86Y07 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
VRK2Q86Y07 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK2Q86Y07 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK2Q86Y07 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VRK2Q86Y07 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
VRK2Q86Y07 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK2Q86Y07 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.63■□□□□ 0.25
VRK2Q86Y07 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK2Q86Y07 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.63■□□□□ 0.25
VRK2Q86Y07 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK2Q86Y07 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
VRK2Q86Y07 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK2Q86Y07 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VRK2Q86Y07 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK2Q86Y07 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
VRK2Q86Y07 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK2Q86Y07 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK2Q86Y07 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK2Q86Y07 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VRK2Q86Y07 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.62■□□□□ 0.25
VRK2Q86Y07 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
VRK2Q86Y07 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK2Q86Y07 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
VRK2Q86Y07 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.62■□□□□ 0.25
VRK2Q86Y07 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK2Q86Y07 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK2Q86Y07 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.62■□□□□ 0.25
VRK2Q86Y07 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.62■□□□□ 0.25
VRK2Q86Y07 RASA4DP-201ENST00000460726 1199 ntBASIC16.62■□□□□ 0.25
VRK2Q86Y07 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
VRK2Q86Y07 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK2Q86Y07 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.62■□□□□ 0.25
VRK2Q86Y07 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.62■□□□□ 0.25
VRK2Q86Y07 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.62■□□□□ 0.25
VRK2Q86Y07 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.62■□□□□ 0.25
VRK2Q86Y07 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK2Q86Y07 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.62■□□□□ 0.25
VRK2Q86Y07 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VRK2Q86Y07 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.62■□□□□ 0.25
VRK2Q86Y07 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.62■□□□□ 0.25
VRK2Q86Y07 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.62■□□□□ 0.25
VRK2Q86Y07 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.62■□□□□ 0.25
VRK2Q86Y07 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK2Q86Y07 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
VRK2Q86Y07 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK2Q86Y07 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VRK2Q86Y07 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.62■□□□□ 0.25
VRK2Q86Y07 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK2Q86Y07 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.62■□□□□ 0.25
VRK2Q86Y07 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.61■□□□□ 0.25
VRK2Q86Y07 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.61■□□□□ 0.25
VRK2Q86Y07 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VRK2Q86Y07 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VRK2Q86Y07 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
VRK2Q86Y07 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.61■□□□□ 0.25
VRK2Q86Y07 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VRK2Q86Y07 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
VRK2Q86Y07 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VRK2Q86Y07 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VRK2Q86Y07 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.61■□□□□ 0.25
VRK2Q86Y07 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.61■□□□□ 0.25
VRK2Q86Y07 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.61■□□□□ 0.25
VRK2Q86Y07 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
VRK2Q86Y07 COX11P1-201ENST00000489116 835 ntBASIC16.61■□□□□ 0.25
VRK2Q86Y07 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VRK2Q86Y07 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.61■□□□□ 0.25
VRK2Q86Y07 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VRK2Q86Y07 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.61■□□□□ 0.25
VRK2Q86Y07 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.61■□□□□ 0.25
VRK2Q86Y07 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.61■□□□□ 0.25
VRK2Q86Y07 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VRK2Q86Y07 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.61■□□□□ 0.25
VRK2Q86Y07 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
VRK2Q86Y07 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VRK2Q86Y07 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
VRK2Q86Y07 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.61■□□□□ 0.25
VRK2Q86Y07 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
VRK2Q86Y07 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VRK2Q86Y07 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.61■□□□□ 0.25
VRK2Q86Y07 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.61■□□□□ 0.25
VRK2Q86Y07 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.61■□□□□ 0.25
VRK2Q86Y07 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VRK2Q86Y07 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VRK2Q86Y07 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms