Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 RCN1P1-201ENST00000400413 996 ntBASIC16.39■□□□□ 0.21
NIPAL3Q6P499 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 SEC1P-202ENST00000473944 940 ntBASIC16.39■□□□□ 0.21
NIPAL3Q6P499 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 AC010240.3-201ENST00000607688 395 ntBASIC16.39■□□□□ 0.21
NIPAL3Q6P499 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 AC009102.3-201ENST00000623118 1491 ntBASIC16.39■□□□□ 0.21
NIPAL3Q6P499 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 AL163051.1-201ENST00000569214 1512 ntBASIC16.39■□□□□ 0.21
NIPAL3Q6P499 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 AC117947.1-201ENST00000427448 529 ntBASIC16.38■□□□□ 0.21
NIPAL3Q6P499 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 KRT18P21-201ENST00000515767 1272 ntBASIC16.38■□□□□ 0.21
NIPAL3Q6P499 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 GCSHP2-201ENST00000560971 527 ntBASIC16.38■□□□□ 0.21
NIPAL3Q6P499 AC009065.1-201ENST00000564055 1225 ntBASIC16.38■□□□□ 0.21
NIPAL3Q6P499 RN7SL850P-201ENST00000579959 291 ntBASIC16.38■□□□□ 0.21
NIPAL3Q6P499 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.38■□□□□ 0.21
NIPAL3Q6P499 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 AC093010.1-201ENST00000473625 1624 ntBASIC16.37■□□□□ 0.21
NIPAL3Q6P499 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 MIR149-201ENST00000384879 89 ntBASIC16.37■□□□□ 0.21
NIPAL3Q6P499 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 YBX1P2-201ENST00000489612 999 ntBASIC16.37■□□□□ 0.21
NIPAL3Q6P499 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 AL441883.1-201ENST00000566170 1045 ntBASIC16.37■□□□□ 0.21
NIPAL3Q6P499 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
NIPAL3Q6P499 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms