Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 CHCHD2P8-201ENST00000429873 447 ntBASIC18.68■□□□□ 0.58
TRNP1Q6NT89 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 BX276092.5-203ENST00000456199 560 ntBASIC18.68■□□□□ 0.58
TRNP1Q6NT89 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 AL121672.3-201ENST00000608644 468 ntBASIC18.68■□□□□ 0.58
TRNP1Q6NT89 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRNP1Q6NT89 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 AC020763.4-201ENST00000623414 4170 ntBASIC18.67■□□□□ 0.58
TRNP1Q6NT89 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 REXO1L11P-201ENST00000620964 1927 ntBASIC18.67■□□□□ 0.58
TRNP1Q6NT89 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 TSSC2-201ENST00000450217 709 ntBASIC18.67■□□□□ 0.58
TRNP1Q6NT89 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 MIR3180-1-201ENST00000580374 94 ntBASIC18.67■□□□□ 0.58
TRNP1Q6NT89 MIR3180-3-201ENST00000584616 94 ntBASIC18.67■□□□□ 0.58
TRNP1Q6NT89 NPAP1P7-201ENST00000613027 823 ntBASIC18.67■□□□□ 0.58
TRNP1Q6NT89 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRNP1Q6NT89 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 GUSBP12-201ENST00000513727 720 ntBASIC18.66■□□□□ 0.58
TRNP1Q6NT89 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 AC090616.6-201ENST00000582640 721 ntBASIC18.66■□□□□ 0.58
TRNP1Q6NT89 IGHV3-41-201ENST00000613121 348 ntBASIC18.66■□□□□ 0.58
TRNP1Q6NT89 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRNP1Q6NT89 AC026471.1-201ENST00000564629 3026 ntBASIC18.66■□□□□ 0.58
TRNP1Q6NT89 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms