Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD47Q08722 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD47Q08722 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.72■□□□□ 0.27
CD47Q08722 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD47Q08722 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.72■□□□□ 0.27
CD47Q08722 KRT18P55-202ENST00000578578 1546 ntBASIC16.72■□□□□ 0.27
CD47Q08722 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD47Q08722 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD47Q08722 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.72■□□□□ 0.27
CD47Q08722 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
CD47Q08722 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD47Q08722 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.72■□□□□ 0.27
CD47Q08722 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.72■□□□□ 0.27
CD47Q08722 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.72■□□□□ 0.27
CD47Q08722 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD47Q08722 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.72■□□□□ 0.27
CD47Q08722 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.72■□□□□ 0.27
CD47Q08722 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CD47Q08722 DGCR10-201ENST00000609839 495 ntBASIC16.72■□□□□ 0.27
CD47Q08722 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD47Q08722 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.72■□□□□ 0.27
CD47Q08722 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.72■□□□□ 0.27
CD47Q08722 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.72■□□□□ 0.27
CD47Q08722 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD47Q08722 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD47Q08722 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD47Q08722 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD47Q08722 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD47Q08722 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CD47Q08722 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD47Q08722 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.71■□□□□ 0.27
CD47Q08722 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
CD47Q08722 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD47Q08722 UBALD1-205ENST00000590891 2641 ntBASIC16.71■□□□□ 0.27
CD47Q08722 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CD47Q08722 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.71■□□□□ 0.27
CD47Q08722 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.71■□□□□ 0.27
CD47Q08722 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CD47Q08722 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.71■□□□□ 0.27
CD47Q08722 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CD47Q08722 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CD47Q08722 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD47Q08722 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD47Q08722 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CD47Q08722 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.71■□□□□ 0.27
CD47Q08722 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.71■□□□□ 0.27
CD47Q08722 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.71■□□□□ 0.27
CD47Q08722 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD47Q08722 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CD47Q08722 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.71■□□□□ 0.27
CD47Q08722 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.71■□□□□ 0.27
CD47Q08722 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.71■□□□□ 0.27
CD47Q08722 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.71■□□□□ 0.27
CD47Q08722 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD47Q08722 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CD47Q08722 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD47Q08722 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD47Q08722 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD47Q08722 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CD47Q08722 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CD47Q08722 AC046158.3-201ENST00000624947 2558 ntBASIC16.71■□□□□ 0.26
CD47Q08722 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CD47Q08722 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
CD47Q08722 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CD47Q08722 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CD47Q08722 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
CD47Q08722 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD47Q08722 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.7■□□□□ 0.26
CD47Q08722 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD47Q08722 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD47Q08722 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.7■□□□□ 0.26
CD47Q08722 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.7■□□□□ 0.26
CD47Q08722 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.7■□□□□ 0.26
CD47Q08722 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD47Q08722 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD47Q08722 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD47Q08722 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD47Q08722 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD47Q08722 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CD47Q08722 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD47Q08722 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD47Q08722 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD47Q08722 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.7■□□□□ 0.26
CD47Q08722 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.7■□□□□ 0.26
CD47Q08722 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.7■□□□□ 0.26
CD47Q08722 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CD47Q08722 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.7■□□□□ 0.26
CD47Q08722 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD47Q08722 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CD47Q08722 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CD47Q08722 MIR718-201ENST00000390190 70 ntBASIC16.7■□□□□ 0.26
CD47Q08722 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.7■□□□□ 0.26
CD47Q08722 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.7■□□□□ 0.26
CD47Q08722 MFAP1P1-201ENST00000442257 1255 ntBASIC16.7■□□□□ 0.26
CD47Q08722 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.7■□□□□ 0.26
CD47Q08722 AC116562.2-201ENST00000507042 360 ntBASIC16.7■□□□□ 0.26
CD47Q08722 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.7■□□□□ 0.26
CD47Q08722 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.7■□□□□ 0.26
CD47Q08722 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.7■□□□□ 0.26
CD47Q08722 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms