Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBXN1Q04323 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.71■□□□□ 0.75
UBXN1Q04323 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBXN1Q04323 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBXN1Q04323 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBXN1Q04323 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
UBXN1Q04323 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
UBXN1Q04323 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
UBXN1Q04323 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBXN1Q04323 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBXN1Q04323 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBXN1Q04323 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.7■□□□□ 0.74
UBXN1Q04323 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
UBXN1Q04323 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBXN1Q04323 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBXN1Q04323 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.7■□□□□ 0.74
UBXN1Q04323 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBXN1Q04323 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBXN1Q04323 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.7■□□□□ 0.74
UBXN1Q04323 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBXN1Q04323 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBXN1Q04323 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBXN1Q04323 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBXN1Q04323 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBXN1Q04323 SNORA78-201ENST00000459373 127 ntBASIC19.7■□□□□ 0.74
UBXN1Q04323 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.7■□□□□ 0.74
UBXN1Q04323 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.7■□□□□ 0.74
UBXN1Q04323 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBXN1Q04323 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBXN1Q04323 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
UBXN1Q04323 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBXN1Q04323 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBXN1Q04323 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBXN1Q04323 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBXN1Q04323 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBXN1Q04323 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBXN1Q04323 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBXN1Q04323 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBXN1Q04323 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
UBXN1Q04323 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.7■□□□□ 0.74
UBXN1Q04323 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBXN1Q04323 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.7■□□□□ 0.74
UBXN1Q04323 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
UBXN1Q04323 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBXN1Q04323 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBXN1Q04323 PCDHA12-202ENST00000613593 2588 ntBASIC19.69■□□□□ 0.74
UBXN1Q04323 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBXN1Q04323 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
UBXN1Q04323 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.69■□□□□ 0.74
UBXN1Q04323 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBXN1Q04323 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBXN1Q04323 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBXN1Q04323 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.69■□□□□ 0.74
UBXN1Q04323 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
UBXN1Q04323 AC009947.2-201ENST00000444014 672 ntBASIC19.69■□□□□ 0.74
UBXN1Q04323 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.69■□□□□ 0.74
UBXN1Q04323 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.69■□□□□ 0.74
UBXN1Q04323 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.69■□□□□ 0.74
UBXN1Q04323 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBXN1Q04323 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBXN1Q04323 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBXN1Q04323 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.69■□□□□ 0.74
UBXN1Q04323 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
UBXN1Q04323 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.69■□□□□ 0.74
UBXN1Q04323 KRT17P2-201ENST00000300992 1314 ntBASIC19.69■□□□□ 0.74
UBXN1Q04323 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBXN1Q04323 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
UBXN1Q04323 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBXN1Q04323 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBXN1Q04323 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBXN1Q04323 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.69■□□□□ 0.74
UBXN1Q04323 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.69■□□□□ 0.74
UBXN1Q04323 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBXN1Q04323 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
UBXN1Q04323 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBXN1Q04323 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
UBXN1Q04323 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.68■□□□□ 0.74
UBXN1Q04323 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBXN1Q04323 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
UBXN1Q04323 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
UBXN1Q04323 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.68■□□□□ 0.74
UBXN1Q04323 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBXN1Q04323 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
UBXN1Q04323 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
UBXN1Q04323 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBXN1Q04323 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBXN1Q04323 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBXN1Q04323 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBXN1Q04323 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBXN1Q04323 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
UBXN1Q04323 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBXN1Q04323 AC128688.1-201ENST00000487626 519 ntBASIC19.68■□□□□ 0.74
UBXN1Q04323 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.68■□□□□ 0.74
UBXN1Q04323 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBXN1Q04323 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.68■□□□□ 0.74
UBXN1Q04323 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.68■□□□□ 0.74
UBXN1Q04323 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBXN1Q04323 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.68■□□□□ 0.74
UBXN1Q04323 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.68■□□□□ 0.74
UBXN1Q04323 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms