Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK3Q00526 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.64■□□□□ 0.41
CDK3Q00526 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDK3Q00526 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK3Q00526 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK3Q00526 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.64■□□□□ 0.41
CDK3Q00526 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK3Q00526 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK3Q00526 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDK3Q00526 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.64■□□□□ 0.41
CDK3Q00526 AC096633.1-201ENST00000422446 749 ntBASIC17.64■□□□□ 0.41
CDK3Q00526 SAPCD2P3-201ENST00000455031 850 ntBASIC17.64■□□□□ 0.41
CDK3Q00526 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CDK3Q00526 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.64■□□□□ 0.41
CDK3Q00526 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDK3Q00526 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.64■□□□□ 0.41
CDK3Q00526 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDK3Q00526 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDK3Q00526 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.64■□□□□ 0.41
CDK3Q00526 AC020763.4-201ENST00000623414 4170 ntBASIC17.64■□□□□ 0.41
CDK3Q00526 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK3Q00526 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK3Q00526 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK3Q00526 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK3Q00526 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDK3Q00526 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK3Q00526 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK3Q00526 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.64■□□□□ 0.41
CDK3Q00526 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK3Q00526 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDK3Q00526 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK3Q00526 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CDK3Q00526 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.64■□□□□ 0.41
CDK3Q00526 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDK3Q00526 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.64■□□□□ 0.41
CDK3Q00526 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK3Q00526 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK3Q00526 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK3Q00526 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CDK3Q00526 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK3Q00526 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK3Q00526 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK3Q00526 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK3Q00526 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK3Q00526 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK3Q00526 AC026396.1-201ENST00000419388 421 ntBASIC17.63■□□□□ 0.41
CDK3Q00526 AC007967.3-201ENST00000434308 558 ntBASIC17.63■□□□□ 0.41
CDK3Q00526 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK3Q00526 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.63■□□□□ 0.41
CDK3Q00526 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.63■□□□□ 0.41
CDK3Q00526 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.63■□□□□ 0.41
CDK3Q00526 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.63■□□□□ 0.41
CDK3Q00526 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CDK3Q00526 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CDK3Q00526 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK3Q00526 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK3Q00526 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK3Q00526 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.63■□□□□ 0.41
CDK3Q00526 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK3Q00526 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK3Q00526 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.63■□□□□ 0.41
CDK3Q00526 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK3Q00526 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK3Q00526 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK3Q00526 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK3Q00526 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDK3Q00526 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CDK3Q00526 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.62■□□□□ 0.41
CDK3Q00526 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK3Q00526 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK3Q00526 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDK3Q00526 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDK3Q00526 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CDK3Q00526 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDK3Q00526 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK3Q00526 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK3Q00526 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK3Q00526 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK3Q00526 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CDK3Q00526 AP000997.3-201ENST00000623333 2250 ntBASIC17.62■□□□□ 0.41
CDK3Q00526 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.62■□□□□ 0.41
CDK3Q00526 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDK3Q00526 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDK3Q00526 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK3Q00526 AC079781.3-201ENST00000449110 356 ntBASIC17.62■□□□□ 0.41
CDK3Q00526 AC132008.2-207ENST00000454517 770 ntBASIC17.62■□□□□ 0.41
CDK3Q00526 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK3Q00526 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDK3Q00526 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CDK3Q00526 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.62■□□□□ 0.41
CDK3Q00526 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.62■□□□□ 0.41
CDK3Q00526 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.62■□□□□ 0.41
CDK3Q00526 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.62■□□□□ 0.41
CDK3Q00526 AL031008.1-201ENST00000619963 541 ntBASIC17.62■□□□□ 0.41
CDK3Q00526 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.62■□□□□ 0.41
CDK3Q00526 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.62■□□□□ 0.41
CDK3Q00526 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK3Q00526 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
CDK3Q00526 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK3Q00526 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms