Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 AC092647.4-201ENST00000457211 535 ntBASIC20.08■□□□□ 0.81
ASIC1P78348 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ASIC1P78348 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ASIC1P78348 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.08■□□□□ 0.81
ASIC1P78348 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.08■□□□□ 0.81
ASIC1P78348 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.08■□□□□ 0.81
ASIC1P78348 RN7SL850P-201ENST00000579959 291 ntBASIC20.08■□□□□ 0.81
ASIC1P78348 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
ASIC1P78348 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
ASIC1P78348 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ASIC1P78348 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
ASIC1P78348 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ASIC1P78348 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.8
ASIC1P78348 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ASIC1P78348 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.08■□□□□ 0.8
ASIC1P78348 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ASIC1P78348 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.08■□□□□ 0.8
ASIC1P78348 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ASIC1P78348 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
ASIC1P78348 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ASIC1P78348 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ASIC1P78348 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ASIC1P78348 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ASIC1P78348 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ASIC1P78348 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ASIC1P78348 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ASIC1P78348 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ASIC1P78348 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.07■□□□□ 0.8
ASIC1P78348 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ASIC1P78348 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.07■□□□□ 0.8
ASIC1P78348 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
ASIC1P78348 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ASIC1P78348 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ASIC1P78348 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ASIC1P78348 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.07■□□□□ 0.8
ASIC1P78348 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.07■□□□□ 0.8
ASIC1P78348 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.07■□□□□ 0.8
ASIC1P78348 RCN1P1-201ENST00000400413 996 ntBASIC20.07■□□□□ 0.8
ASIC1P78348 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.07■□□□□ 0.8
ASIC1P78348 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ASIC1P78348 AC112907.2-201ENST00000448639 330 ntBASIC20.07■□□□□ 0.8
ASIC1P78348 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
ASIC1P78348 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ASIC1P78348 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ASIC1P78348 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
ASIC1P78348 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ASIC1P78348 FZD10-202ENST00000539839 3282 ntBASIC20.07■□□□□ 0.8
ASIC1P78348 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ASIC1P78348 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.07■□□□□ 0.8
ASIC1P78348 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ASIC1P78348 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ASIC1P78348 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ASIC1P78348 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
ASIC1P78348 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
ASIC1P78348 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
ASIC1P78348 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
ASIC1P78348 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ASIC1P78348 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.06■□□□□ 0.8
ASIC1P78348 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ASIC1P78348 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ASIC1P78348 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.06■□□□□ 0.8
ASIC1P78348 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ASIC1P78348 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ASIC1P78348 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ASIC1P78348 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ASIC1P78348 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.06■□□□□ 0.8
ASIC1P78348 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.06■□□□□ 0.8
ASIC1P78348 AC006116.8-202ENST00000587620 1550 ntBASIC20.06■□□□□ 0.8
ASIC1P78348 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.06■□□□□ 0.8
ASIC1P78348 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.06■□□□□ 0.8
ASIC1P78348 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ASIC1P78348 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.06■□□□□ 0.8
ASIC1P78348 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ASIC1P78348 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ASIC1P78348 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.05■□□□□ 0.8
ASIC1P78348 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ASIC1P78348 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.05■□□□□ 0.8
ASIC1P78348 AC022898.2-201ENST00000616822 1312 ntBASIC20.05■□□□□ 0.8
ASIC1P78348 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ASIC1P78348 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ASIC1P78348 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ASIC1P78348 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ASIC1P78348 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ASIC1P78348 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
ASIC1P78348 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ASIC1P78348 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ASIC1P78348 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ASIC1P78348 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ASIC1P78348 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ASIC1P78348 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ASIC1P78348 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ASIC1P78348 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.05■□□□□ 0.8
ASIC1P78348 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ASIC1P78348 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.05■□□□□ 0.8
ASIC1P78348 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.05■□□□□ 0.8
ASIC1P78348 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.05■□□□□ 0.8
ASIC1P78348 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.05■□□□□ 0.8
ASIC1P78348 AC004263.2-201ENST00000617183 678 ntBASIC20.05■□□□□ 0.8
ASIC1P78348 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.05■□□□□ 0.8
ASIC1P78348 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms