Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.79■□□□□ 0.76
PEX3P56589 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
PEX3P56589 Z69720.1-201ENST00000601483 472 ntBASIC19.79■□□□□ 0.76
PEX3P56589 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PEX3P56589 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PEX3P56589 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
PEX3P56589 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.79■□□□□ 0.76
PEX3P56589 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 AC007613.1-201ENST00000572811 2597 ntBASIC19.79■□□□□ 0.76
PEX3P56589 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
PEX3P56589 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
PEX3P56589 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PEX3P56589 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.78■□□□□ 0.76
PEX3P56589 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.78■□□□□ 0.76
PEX3P56589 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
PEX3P56589 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PEX3P56589 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.78■□□□□ 0.76
PEX3P56589 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PEX3P56589 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PEX3P56589 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.78■□□□□ 0.76
PEX3P56589 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PEX3P56589 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.78■□□□□ 0.76
PEX3P56589 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PEX3P56589 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PEX3P56589 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
PEX3P56589 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PEX3P56589 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PEX3P56589 KRT17P6-201ENST00000453795 1220 ntBASIC19.78■□□□□ 0.76
PEX3P56589 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.78■□□□□ 0.76
PEX3P56589 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PEX3P56589 AC074051.2-201ENST00000565115 352 ntBASIC19.78■□□□□ 0.76
PEX3P56589 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.78■□□□□ 0.76
PEX3P56589 AC005336.2-201ENST00000593183 939 ntBASIC19.78■□□□□ 0.76
PEX3P56589 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PEX3P56589 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PEX3P56589 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.78■□□□□ 0.76
PEX3P56589 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.78■□□□□ 0.76
PEX3P56589 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.78■□□□□ 0.76
PEX3P56589 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PEX3P56589 KRT8P47-201ENST00000604727 1398 ntBASIC19.78■□□□□ 0.76
PEX3P56589 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
PEX3P56589 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PEX3P56589 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PEX3P56589 HCG11-201ENST00000411553 5696 ntBASIC19.78■□□□□ 0.76
PEX3P56589 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PEX3P56589 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PEX3P56589 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PEX3P56589 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PEX3P56589 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.77■□□□□ 0.76
PEX3P56589 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.77■□□□□ 0.76
PEX3P56589 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.77■□□□□ 0.76
PEX3P56589 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PEX3P56589 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.77■□□□□ 0.76
PEX3P56589 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PEX3P56589 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PEX3P56589 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PEX3P56589 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PEX3P56589 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.77■□□□□ 0.76
PEX3P56589 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.77■□□□□ 0.76
PEX3P56589 AC012615.1-201ENST00000565797 1299 ntBASIC19.77■□□□□ 0.76
PEX3P56589 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.77■□□□□ 0.76
PEX3P56589 MIR3652-201ENST00000579335 131 ntBASIC19.77■□□□□ 0.76
PEX3P56589 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PEX3P56589 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.77■□□□□ 0.76
PEX3P56589 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PEX3P56589 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.77■□□□□ 0.76
PEX3P56589 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PEX3P56589 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
PEX3P56589 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
PEX3P56589 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PEX3P56589 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PEX3P56589 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PEX3P56589 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PEX3P56589 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PEX3P56589 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PEX3P56589 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
PEX3P56589 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PEX3P56589 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.76■□□□□ 0.75
PEX3P56589 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.76■□□□□ 0.75
PEX3P56589 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.76■□□□□ 0.75
PEX3P56589 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.76■□□□□ 0.75
PEX3P56589 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
PEX3P56589 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.76■□□□□ 0.75
PEX3P56589 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms