Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.17□□□□□ -0.3
APOC4P55056 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.17□□□□□ -0.3
APOC4P55056 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.17□□□□□ -0.3
APOC4P55056 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC4P55056 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
APOC4P55056 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC4P55056 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.16□□□□□ -0.3
APOC4P55056 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
APOC4P55056 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC4P55056 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.16□□□□□ -0.3
APOC4P55056 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC4P55056 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC4P55056 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC4P55056 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC4P55056 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.16□□□□□ -0.3
APOC4P55056 AL845331.1-201ENST00000424978 1190 ntBASIC13.16□□□□□ -0.3
APOC4P55056 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC4P55056 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.16□□□□□ -0.3
APOC4P55056 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
APOC4P55056 AC112698.1-201ENST00000510299 916 ntBASIC13.16□□□□□ -0.3
APOC4P55056 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.16□□□□□ -0.3
APOC4P55056 AP005901.3-202ENST00000581653 237 ntBASIC13.16□□□□□ -0.3
APOC4P55056 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.16□□□□□ -0.3
APOC4P55056 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.16□□□□□ -0.3
APOC4P55056 AL121894.2-201ENST00000602977 491 ntBASIC13.16□□□□□ -0.3
APOC4P55056 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.16□□□□□ -0.3
APOC4P55056 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
APOC4P55056 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
APOC4P55056 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC4P55056 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC4P55056 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC4P55056 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOC4P55056 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOC4P55056 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOC4P55056 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
APOC4P55056 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
APOC4P55056 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC4P55056 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
APOC4P55056 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC4P55056 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC4P55056 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC4P55056 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
APOC4P55056 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC4P55056 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC4P55056 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.15□□□□□ -0.3
APOC4P55056 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOC4P55056 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
APOC4P55056 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC4P55056 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC4P55056 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC4P55056 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.15□□□□□ -0.3
APOC4P55056 AC026396.1-201ENST00000419388 421 ntBASIC13.15□□□□□ -0.3
APOC4P55056 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.15□□□□□ -0.3
APOC4P55056 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.15□□□□□ -0.3
APOC4P55056 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.15□□□□□ -0.3
APOC4P55056 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.15□□□□□ -0.3
APOC4P55056 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.15□□□□□ -0.3
APOC4P55056 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC4P55056 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC4P55056 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOC4P55056 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC4P55056 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.15□□□□□ -0.3
APOC4P55056 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOC4P55056 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOC4P55056 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC4P55056 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
APOC4P55056 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
APOC4P55056 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
APOC4P55056 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC4P55056 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC4P55056 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
APOC4P55056 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.14□□□□□ -0.31
APOC4P55056 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
APOC4P55056 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC4P55056 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC4P55056 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC4P55056 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC4P55056 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
APOC4P55056 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC4P55056 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
APOC4P55056 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC4P55056 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC4P55056 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
APOC4P55056 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC4P55056 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC4P55056 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.14□□□□□ -0.31
APOC4P55056 SAPCD2P3-201ENST00000455031 850 ntBASIC13.14□□□□□ -0.31
APOC4P55056 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.14□□□□□ -0.31
APOC4P55056 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.14□□□□□ -0.31
APOC4P55056 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.14□□□□□ -0.31
APOC4P55056 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.14□□□□□ -0.31
APOC4P55056 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.14□□□□□ -0.31
APOC4P55056 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms