Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
EPHB4P54760 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EPHB4P54760 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.18■□□□□ 0.82
EPHB4P54760 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EPHB4P54760 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
EPHB4P54760 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.18■□□□□ 0.82
EPHB4P54760 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.18■□□□□ 0.82
EPHB4P54760 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EPHB4P54760 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.18■□□□□ 0.82
EPHB4P54760 AC140113.2-201ENST00000604370 208 ntBASIC20.18■□□□□ 0.82
EPHB4P54760 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EPHB4P54760 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EPHB4P54760 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EPHB4P54760 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
EPHB4P54760 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.18■□□□□ 0.82
EPHB4P54760 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
EPHB4P54760 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.18■□□□□ 0.82
EPHB4P54760 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
EPHB4P54760 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EPHB4P54760 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
EPHB4P54760 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.18■□□□□ 0.82
EPHB4P54760 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.17■□□□□ 0.82
EPHB4P54760 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.17■□□□□ 0.82
EPHB4P54760 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.17■□□□□ 0.82
EPHB4P54760 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EPHB4P54760 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EPHB4P54760 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EPHB4P54760 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.17■□□□□ 0.82
EPHB4P54760 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.17■□□□□ 0.82
EPHB4P54760 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.17■□□□□ 0.82
EPHB4P54760 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.17■□□□□ 0.82
EPHB4P54760 FGFR3P6-201ENST00000457012 610 ntBASIC20.17■□□□□ 0.82
EPHB4P54760 AC096582.2-201ENST00000510860 516 ntBASIC20.17■□□□□ 0.82
EPHB4P54760 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.17■□□□□ 0.82
EPHB4P54760 AP001160.2-201ENST00000596071 487 ntBASIC20.17■□□□□ 0.82
EPHB4P54760 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EPHB4P54760 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
EPHB4P54760 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EPHB4P54760 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.17■□□□□ 0.82
EPHB4P54760 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EPHB4P54760 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EPHB4P54760 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
EPHB4P54760 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
EPHB4P54760 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.17■□□□□ 0.82
EPHB4P54760 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EPHB4P54760 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
EPHB4P54760 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EPHB4P54760 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EPHB4P54760 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EPHB4P54760 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPHB4P54760 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPHB4P54760 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.16■□□□□ 0.82
EPHB4P54760 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPHB4P54760 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPHB4P54760 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EPHB4P54760 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPHB4P54760 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.16■□□□□ 0.82
EPHB4P54760 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPHB4P54760 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPHB4P54760 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
EPHB4P54760 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPHB4P54760 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.16■□□□□ 0.82
EPHB4P54760 UPF3AP3-201ENST00000420996 769 ntBASIC20.16■□□□□ 0.82
EPHB4P54760 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.16■□□□□ 0.82
EPHB4P54760 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.16■□□□□ 0.82
EPHB4P54760 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.16■□□□□ 0.82
EPHB4P54760 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EPHB4P54760 AC010327.4-202ENST00000591484 748 ntBASIC20.16■□□□□ 0.82
EPHB4P54760 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPHB4P54760 AC114341.1-201ENST00000618070 349 ntBASIC20.16■□□□□ 0.82
EPHB4P54760 AL355877.3-201ENST00000622820 899 ntBASIC20.16■□□□□ 0.82
EPHB4P54760 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.16■□□□□ 0.82
EPHB4P54760 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
EPHB4P54760 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
EPHB4P54760 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.16■□□□□ 0.82
EPHB4P54760 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPHB4P54760 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPHB4P54760 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
EPHB4P54760 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.16■□□□□ 0.82
EPHB4P54760 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPHB4P54760 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EPHB4P54760 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPHB4P54760 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPHB4P54760 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPHB4P54760 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
EPHB4P54760 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.15■□□□□ 0.82
EPHB4P54760 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPHB4P54760 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPHB4P54760 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPHB4P54760 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPHB4P54760 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.15■□□□□ 0.82
EPHB4P54760 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.15■□□□□ 0.82
EPHB4P54760 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.15■□□□□ 0.82
EPHB4P54760 RPSAP43-201ENST00000402237 625 ntBASIC20.15■□□□□ 0.82
EPHB4P54760 AC098831.1-202ENST00000438821 336 ntBASIC20.15■□□□□ 0.82
EPHB4P54760 SCARNA2-201ENST00000458748 420 ntBASIC20.15■□□□□ 0.82
EPHB4P54760 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPHB4P54760 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
EPHB4P54760 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.15■□□□□ 0.82
EPHB4P54760 AL356488.2-201ENST00000602755 427 ntBASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms