Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.61■□□□□ 0.41
CLCNKAP51800 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.61■□□□□ 0.41
CLCNKAP51800 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.61■□□□□ 0.41
CLCNKAP51800 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.61■□□□□ 0.41
CLCNKAP51800 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.61■□□□□ 0.41
CLCNKAP51800 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CLCNKAP51800 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
CLCNKAP51800 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.61■□□□□ 0.41
CLCNKAP51800 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
CLCNKAP51800 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CLCNKAP51800 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.61■□□□□ 0.41
CLCNKAP51800 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLCNKAP51800 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCNKAP51800 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCNKAP51800 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCNKAP51800 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.6■□□□□ 0.41
CLCNKAP51800 REXO1L9P-201ENST00000604264 2108 ntBASIC17.6■□□□□ 0.41
CLCNKAP51800 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.6■□□□□ 0.41
CLCNKAP51800 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCNKAP51800 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCNKAP51800 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCNKAP51800 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCNKAP51800 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLCNKAP51800 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCNKAP51800 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.6■□□□□ 0.41
CLCNKAP51800 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCNKAP51800 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLCNKAP51800 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CLCNKAP51800 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.6■□□□□ 0.41
CLCNKAP51800 KRT16P4-201ENST00000453883 522 ntBASIC17.6■□□□□ 0.41
CLCNKAP51800 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.6■□□□□ 0.41
CLCNKAP51800 AC112698.1-201ENST00000510299 916 ntBASIC17.6■□□□□ 0.41
CLCNKAP51800 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.6■□□□□ 0.41
CLCNKAP51800 AC111152.3-201ENST00000569699 673 ntBASIC17.6■□□□□ 0.41
CLCNKAP51800 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.6■□□□□ 0.41
CLCNKAP51800 AC005336.2-201ENST00000593183 939 ntBASIC17.6■□□□□ 0.41
CLCNKAP51800 AC099336.1-202ENST00000602961 463 ntBASIC17.6■□□□□ 0.41
CLCNKAP51800 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.6■□□□□ 0.41
CLCNKAP51800 AL691432.3-201ENST00000621860 400 ntBASIC17.6■□□□□ 0.41
CLCNKAP51800 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCNKAP51800 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CLCNKAP51800 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
CLCNKAP51800 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.6■□□□□ 0.41
CLCNKAP51800 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLCNKAP51800 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCNKAP51800 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCNKAP51800 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.6■□□□□ 0.41
CLCNKAP51800 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.6■□□□□ 0.41
CLCNKAP51800 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.6■□□□□ 0.41
CLCNKAP51800 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCNKAP51800 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
CLCNKAP51800 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCNKAP51800 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCNKAP51800 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCNKAP51800 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCNKAP51800 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCNKAP51800 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCNKAP51800 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCNKAP51800 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCNKAP51800 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCNKAP51800 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCNKAP51800 KRT18P31-201ENST00000506277 1292 ntBASIC17.59■□□□□ 0.41
CLCNKAP51800 FOSL1P1-201ENST00000511041 816 ntBASIC17.59■□□□□ 0.41
CLCNKAP51800 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.59■□□□□ 0.41
CLCNKAP51800 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCNKAP51800 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCNKAP51800 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CLCNKAP51800 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCNKAP51800 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCNKAP51800 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCNKAP51800 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CLCNKAP51800 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CLCNKAP51800 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCNKAP51800 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CLCNKAP51800 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.58■□□□□ 0.41
CLCNKAP51800 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.58■□□□□ 0.41
CLCNKAP51800 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLCNKAP51800 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.58■□□□□ 0.41
CLCNKAP51800 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLCNKAP51800 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.58■□□□□ 0.41
CLCNKAP51800 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLCNKAP51800 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms