Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A6P48664 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
SLC1A6P48664 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC1A6P48664 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC1A6P48664 AC132938.6-201ENST00000623828 1655 ntBASIC17.69■□□□□ 0.42
SLC1A6P48664 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A6P48664 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A6P48664 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SLC1A6P48664 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC1A6P48664 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.69■□□□□ 0.42
SLC1A6P48664 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC1A6P48664 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.69■□□□□ 0.42
SLC1A6P48664 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A6P48664 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A6P48664 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
SLC1A6P48664 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC1A6P48664 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A6P48664 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SLC1A6P48664 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A6P48664 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
SLC1A6P48664 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC1A6P48664 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC1A6P48664 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A6P48664 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A6P48664 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A6P48664 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A6P48664 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SLC1A6P48664 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A6P48664 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SLC1A6P48664 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A6P48664 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A6P48664 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A6P48664 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC1A6P48664 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
SLC1A6P48664 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC1A6P48664 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC1A6P48664 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A6P48664 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A6P48664 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A6P48664 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A6P48664 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A6P48664 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC1A6P48664 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A6P48664 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A6P48664 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SLC1A6P48664 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC1A6P48664 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SLC1A6P48664 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A6P48664 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC1A6P48664 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A6P48664 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC1A6P48664 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A6P48664 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC1A6P48664 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A6P48664 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A6P48664 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A6P48664 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC1A6P48664 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A6P48664 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A6P48664 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SLC1A6P48664 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC1A6P48664 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC1A6P48664 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC1A6P48664 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC1A6P48664 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A6P48664 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A6P48664 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A6P48664 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A6P48664 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
SLC1A6P48664 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC1A6P48664 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC1A6P48664 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SLC1A6P48664 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SLC1A6P48664 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A6P48664 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A6P48664 CRYGFP-201ENST00000418459 633 ntBASIC17.67■□□□□ 0.42
SLC1A6P48664 NUDT16P1-203ENST00000513809 620 ntBASIC17.67■□□□□ 0.42
SLC1A6P48664 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC1A6P48664 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.67■□□□□ 0.42
SLC1A6P48664 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC1A6P48664 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.67■□□□□ 0.42
SLC1A6P48664 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC1A6P48664 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC1A6P48664 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC1A6P48664 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
SLC1A6P48664 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A6P48664 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A6P48664 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC1A6P48664 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SLC1A6P48664 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC1A6P48664 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC1A6P48664 LINC00304-203ENST00000565008 1864 ntBASIC17.67■□□□□ 0.42
SLC1A6P48664 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A6P48664 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SLC1A6P48664 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A6P48664 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A6P48664 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC1A6P48664 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A6P48664 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A6P48664 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms