Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CEACAM3P40198 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CEACAM3P40198 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CEACAM3P40198 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CEACAM3P40198 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CEACAM3P40198 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.67□□□□□ -0.06
CEACAM3P40198 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CEACAM3P40198 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CEACAM3P40198 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CEACAM3P40198 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.67□□□□□ -0.06
CEACAM3P40198 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.67□□□□□ -0.06
CEACAM3P40198 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CEACAM3P40198 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.67□□□□□ -0.06
CEACAM3P40198 AC005332.3-201ENST00000589904 676 ntBASIC14.67□□□□□ -0.06
CEACAM3P40198 AC011498.5-201ENST00000592027 486 ntBASIC14.67□□□□□ -0.06
CEACAM3P40198 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.67□□□□□ -0.06
CEACAM3P40198 AL445228.2-201ENST00000605589 952 ntBASIC14.67□□□□□ -0.06
CEACAM3P40198 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
CEACAM3P40198 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CEACAM3P40198 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CEACAM3P40198 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CEACAM3P40198 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CEACAM3P40198 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CEACAM3P40198 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CEACAM3P40198 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CEACAM3P40198 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CEACAM3P40198 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CEACAM3P40198 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
CEACAM3P40198 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CEACAM3P40198 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CEACAM3P40198 AC005332.1-201ENST00000577698 1310 ntBASIC14.66□□□□□ -0.06
CEACAM3P40198 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.66□□□□□ -0.06
CEACAM3P40198 Z83836.1-201ENST00000624605 1642 ntBASIC14.66□□□□□ -0.06
CEACAM3P40198 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CEACAM3P40198 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.66□□□□□ -0.06
CEACAM3P40198 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.66□□□□□ -0.06
CEACAM3P40198 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
CEACAM3P40198 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 LINC00602-201ENST00000629776 2065 ntBASIC14.66□□□□□ -0.06
CEACAM3P40198 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CEACAM3P40198 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CEACAM3P40198 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.66□□□□□ -0.06
CEACAM3P40198 IER3-202ENST00000376377 1350 ntBASIC14.66□□□□□ -0.06
CEACAM3P40198 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.66□□□□□ -0.06
CEACAM3P40198 PCED1CP-201ENST00000419887 785 ntBASIC14.66□□□□□ -0.06
CEACAM3P40198 KRT18P65-201ENST00000439811 1286 ntBASIC14.66□□□□□ -0.06
CEACAM3P40198 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CEACAM3P40198 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 BX276092.5-203ENST00000456199 560 ntBASIC14.66□□□□□ -0.06
CEACAM3P40198 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.66□□□□□ -0.06
CEACAM3P40198 FAM86EP-206ENST00000510506 987 ntBASIC14.66□□□□□ -0.06
CEACAM3P40198 GUSBP12-201ENST00000513727 720 ntBASIC14.66□□□□□ -0.06
CEACAM3P40198 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.66□□□□□ -0.06
CEACAM3P40198 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
CEACAM3P40198 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.66□□□□□ -0.06
CEACAM3P40198 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.66□□□□□ -0.06
CEACAM3P40198 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CEACAM3P40198 AC004263.2-201ENST00000617183 678 ntBASIC14.66□□□□□ -0.06
CEACAM3P40198 AC009154.2-201ENST00000621177 724 ntBASIC14.66□□□□□ -0.06
CEACAM3P40198 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.66□□□□□ -0.06
CEACAM3P40198 AP000550.4-202ENST00000639755 178 ntBASIC14.66□□□□□ -0.06
CEACAM3P40198 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 AC135050.7-201ENST00000624508 2218 ntBASIC14.66□□□□□ -0.06
CEACAM3P40198 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CEACAM3P40198 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.66□□□□□ -0.06
CEACAM3P40198 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.66□□□□□ -0.06
CEACAM3P40198 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
CEACAM3P40198 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CEACAM3P40198 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CEACAM3P40198 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CEACAM3P40198 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CEACAM3P40198 LTB4R2-202ENST00000528054 3092 ntBASIC14.65□□□□□ -0.06
CEACAM3P40198 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CEACAM3P40198 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CEACAM3P40198 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CEACAM3P40198 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CEACAM3P40198 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CEACAM3P40198 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.65□□□□□ -0.06
CEACAM3P40198 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms