Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.67■□□□□ 0.74
KRT9P35527 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.67■□□□□ 0.74
KRT9P35527 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.67■□□□□ 0.74
KRT9P35527 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.67■□□□□ 0.74
KRT9P35527 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT9P35527 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.67■□□□□ 0.74
KRT9P35527 AC112497.1-201ENST00000624824 639 ntBASIC19.67■□□□□ 0.74
KRT9P35527 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT9P35527 AC099398.1-201ENST00000567919 2776 ntBASIC19.67■□□□□ 0.74
KRT9P35527 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
KRT9P35527 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT9P35527 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT9P35527 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT9P35527 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT9P35527 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT9P35527 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT9P35527 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT9P35527 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT9P35527 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT9P35527 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT9P35527 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
KRT9P35527 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT9P35527 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KRT9P35527 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT9P35527 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT9P35527 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT9P35527 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT9P35527 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT9P35527 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT9P35527 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KRT9P35527 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT9P35527 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.66■□□□□ 0.74
KRT9P35527 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
KRT9P35527 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT9P35527 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.66■□□□□ 0.74
KRT9P35527 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT9P35527 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
KRT9P35527 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
KRT9P35527 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.66■□□□□ 0.74
KRT9P35527 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
KRT9P35527 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KRT9P35527 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.66■□□□□ 0.74
KRT9P35527 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.66■□□□□ 0.74
KRT9P35527 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.66■□□□□ 0.74
KRT9P35527 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.66■□□□□ 0.74
KRT9P35527 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT9P35527 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.66■□□□□ 0.74
KRT9P35527 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.66■□□□□ 0.74
KRT9P35527 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT9P35527 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.66■□□□□ 0.74
KRT9P35527 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
KRT9P35527 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.66■□□□□ 0.74
KRT9P35527 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT9P35527 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT9P35527 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT9P35527 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.66■□□□□ 0.74
KRT9P35527 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT9P35527 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KRT9P35527 AL355312.1-201ENST00000407115 2176 ntBASIC19.66■□□□□ 0.74
KRT9P35527 PKD1P1-201ENST00000458669 6805 ntBASIC19.65■□□□□ 0.74
KRT9P35527 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT9P35527 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.65■□□□□ 0.74
KRT9P35527 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT9P35527 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT9P35527 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
KRT9P35527 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.65■□□□□ 0.74
KRT9P35527 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
KRT9P35527 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KRT9P35527 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
KRT9P35527 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
KRT9P35527 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KRT9P35527 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT9P35527 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.65■□□□□ 0.74
KRT9P35527 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.65■□□□□ 0.74
KRT9P35527 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.65■□□□□ 0.74
KRT9P35527 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT9P35527 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.65■□□□□ 0.74
KRT9P35527 AC145285.6-201ENST00000604632 637 ntBASIC19.65■□□□□ 0.74
KRT9P35527 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KRT9P35527 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
KRT9P35527 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KRT9P35527 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.65■□□□□ 0.74
KRT9P35527 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KRT9P35527 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT9P35527 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.65■□□□□ 0.74
KRT9P35527 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT9P35527 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
KRT9P35527 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT9P35527 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.64■□□□□ 0.74
KRT9P35527 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.64■□□□□ 0.74
KRT9P35527 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
KRT9P35527 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
KRT9P35527 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.64■□□□□ 0.74
KRT9P35527 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
KRT9P35527 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
KRT9P35527 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.64■□□□□ 0.73
KRT9P35527 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.64■□□□□ 0.73
KRT9P35527 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.64■□□□□ 0.73
KRT9P35527 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRT9P35527 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms