Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AC025580.3-201ENST00000617932 1424 ntBASIC20.15■□□□□ 0.82
CTGFP29279 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTGFP29279 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTGFP29279 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CTGFP29279 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.15■□□□□ 0.82
CTGFP29279 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CTGFP29279 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTGFP29279 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTGFP29279 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CTGFP29279 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTGFP29279 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CTGFP29279 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTGFP29279 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTGFP29279 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.14■□□□□ 0.81
CTGFP29279 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTGFP29279 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTGFP29279 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTGFP29279 HLA-J-202ENST00000469281 1241 ntBASIC20.14■□□□□ 0.81
CTGFP29279 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.14■□□□□ 0.81
CTGFP29279 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.14■□□□□ 0.81
CTGFP29279 AC004449.1-201ENST00000564240 433 ntBASIC20.14■□□□□ 0.81
CTGFP29279 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.14■□□□□ 0.81
CTGFP29279 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTGFP29279 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTGFP29279 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTGFP29279 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CTGFP29279 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTGFP29279 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CTGFP29279 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.13■□□□□ 0.81
CTGFP29279 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.13■□□□□ 0.81
CTGFP29279 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CTGFP29279 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTGFP29279 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.13■□□□□ 0.81
CTGFP29279 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.13■□□□□ 0.81
CTGFP29279 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.13■□□□□ 0.81
CTGFP29279 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.13■□□□□ 0.81
CTGFP29279 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.13■□□□□ 0.81
CTGFP29279 AC074386.1-202ENST00000463561 864 ntBASIC20.13■□□□□ 0.81
CTGFP29279 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.13■□□□□ 0.81
CTGFP29279 AL390955.2-201ENST00000603032 514 ntBASIC20.13■□□□□ 0.81
CTGFP29279 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.13■□□□□ 0.81
CTGFP29279 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.13■□□□□ 0.81
CTGFP29279 AC105339.1-204ENST00000636249 355 ntBASIC20.13■□□□□ 0.81
CTGFP29279 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.13■□□□□ 0.81
CTGFP29279 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTGFP29279 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CTGFP29279 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.13■□□□□ 0.81
CTGFP29279 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CTGFP29279 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTGFP29279 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTGFP29279 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTGFP29279 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.12■□□□□ 0.81
CTGFP29279 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.12■□□□□ 0.81
CTGFP29279 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CTGFP29279 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTGFP29279 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTGFP29279 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CTGFP29279 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.12■□□□□ 0.81
CTGFP29279 MRPL20P1-201ENST00000400819 433 ntBASIC20.12■□□□□ 0.81
CTGFP29279 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.12■□□□□ 0.81
CTGFP29279 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.12■□□□□ 0.81
CTGFP29279 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.12■□□□□ 0.81
CTGFP29279 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.12■□□□□ 0.81
CTGFP29279 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CTGFP29279 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.12■□□□□ 0.81
CTGFP29279 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CTGFP29279 AL805961.1-202ENST00000641562 540 ntBASIC20.12■□□□□ 0.81
CTGFP29279 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTGFP29279 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.12■□□□□ 0.81
CTGFP29279 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CTGFP29279 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.12■□□□□ 0.81
CTGFP29279 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CTGFP29279 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTGFP29279 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CTGFP29279 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTGFP29279 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CTGFP29279 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.11■□□□□ 0.81
CTGFP29279 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.11■□□□□ 0.81
CTGFP29279 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTGFP29279 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTGFP29279 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
CTGFP29279 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CTGFP29279 PTCHD3P3-201ENST00000403073 906 ntBASIC20.11■□□□□ 0.81
CTGFP29279 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.11■□□□□ 0.81
CTGFP29279 ACTG1P14-201ENST00000446382 1122 ntBASIC20.11■□□□□ 0.81
CTGFP29279 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.11■□□□□ 0.81
CTGFP29279 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.11■□□□□ 0.81
CTGFP29279 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.11■□□□□ 0.81
CTGFP29279 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.11■□□□□ 0.81
CTGFP29279 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
CTGFP29279 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.11■□□□□ 0.81
CTGFP29279 AC004835.2-201ENST00000603762 682 ntBASIC20.11■□□□□ 0.81
CTGFP29279 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.11■□□□□ 0.81
CTGFP29279 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTGFP29279 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CTGFP29279 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.1■□□□□ 0.81
CTGFP29279 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTGFP29279 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CTGFP29279 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTGFP29279 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms