Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RXRBP28702 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RXRBP28702 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
RXRBP28702 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RXRBP28702 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RXRBP28702 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RXRBP28702 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC23.35■■□□□ 1.33
RXRBP28702 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
RXRBP28702 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
RXRBP28702 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC23.35■■□□□ 1.33
RXRBP28702 PARP8-206ENST00000503665 572 ntTSL 4 BASIC23.35■■□□□ 1.33
RXRBP28702 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC23.35■■□□□ 1.33
RXRBP28702 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC23.35■■□□□ 1.33
RXRBP28702 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC23.35■■□□□ 1.33
RXRBP28702 NAA38-206ENST00000576384 424 ntTSL 2 BASIC23.35■■□□□ 1.33
RXRBP28702 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RXRBP28702 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RXRBP28702 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RXRBP28702 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RXRBP28702 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC23.35■■□□□ 1.33
RXRBP28702 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
RXRBP28702 AC004945.1-201ENST00000416738 983 ntBASIC23.34■■□□□ 1.33
RXRBP28702 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC23.34■■□□□ 1.33
RXRBP28702 GALT-202ENST00000450095 1280 ntTSL 2 BASIC23.34■■□□□ 1.33
RXRBP28702 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC23.34■■□□□ 1.33
RXRBP28702 AC004890.2-204ENST00000481968 304 ntBASIC23.34■■□□□ 1.33
RXRBP28702 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC23.34■■□□□ 1.33
RXRBP28702 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC23.34■■□□□ 1.33
RXRBP28702 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC23.34■■□□□ 1.33
RXRBP28702 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC23.34■■□□□ 1.33
RXRBP28702 INO80E-210ENST00000567705 880 ntTSL 3 BASIC23.34■■□□□ 1.33
RXRBP28702 BSG-214ENST00000614867 960 ntTSL 3 BASIC23.34■■□□□ 1.33
RXRBP28702 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
RXRBP28702 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
RXRBP28702 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RXRBP28702 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RXRBP28702 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RXRBP28702 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RXRBP28702 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC23.33■■□□□ 1.33
RXRBP28702 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC23.33■■□□□ 1.33
RXRBP28702 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
RXRBP28702 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RXRBP28702 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RXRBP28702 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RXRBP28702 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RXRBP28702 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.33■■□□□ 1.33
RXRBP28702 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RXRBP28702 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RXRBP28702 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC23.33■■□□□ 1.33
RXRBP28702 MRPS18AP1-201ENST00000414458 589 ntBASIC23.33■■□□□ 1.33
RXRBP28702 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC23.33■■□□□ 1.33
RXRBP28702 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RXRBP28702 AC099522.2-201ENST00000607001 744 ntBASIC23.33■■□□□ 1.33
RXRBP28702 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC23.33■■□□□ 1.33
RXRBP28702 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
RXRBP28702 AC132938.5-201ENST00000624980 1813 ntBASIC23.33■■□□□ 1.32
RXRBP28702 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RXRBP28702 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RXRBP28702 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.32■■□□□ 1.32
RXRBP28702 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RXRBP28702 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
RXRBP28702 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RXRBP28702 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RXRBP28702 CALY-202ENST00000368555 783 ntTSL 2 BASIC23.32■■□□□ 1.32
RXRBP28702 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
RXRBP28702 PGF-202ENST00000405431 666 ntTSL 5 BASIC23.32■■□□□ 1.32
RXRBP28702 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC23.32■■□□□ 1.32
RXRBP28702 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC23.32■■□□□ 1.32
RXRBP28702 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC23.32■■□□□ 1.32
RXRBP28702 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC23.32■■□□□ 1.32
RXRBP28702 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC23.32■■□□□ 1.32
RXRBP28702 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC23.32■■□□□ 1.32
RXRBP28702 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RXRBP28702 RAB34-224ENST00000636513 888 ntTSL 5 BASIC23.32■■□□□ 1.32
RXRBP28702 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RXRBP28702 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RXRBP28702 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RXRBP28702 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC23.32■■□□□ 1.32
RXRBP28702 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC23.32■■□□□ 1.32
RXRBP28702 AC026310.3-201ENST00000625186 2373 ntBASIC23.32■■□□□ 1.32
RXRBP28702 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RXRBP28702 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RXRBP28702 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
RXRBP28702 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RXRBP28702 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RXRBP28702 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
RXRBP28702 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC23.31■■□□□ 1.32
RXRBP28702 SPDYE7P-202ENST00000420373 878 ntBASIC23.31■■□□□ 1.32
RXRBP28702 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RXRBP28702 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RXRBP28702 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RXRBP28702 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC23.31■■□□□ 1.32
RXRBP28702 RN7SL589P-201ENST00000481268 310 ntBASIC23.31■■□□□ 1.32
RXRBP28702 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC23.31■■□□□ 1.32
RXRBP28702 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
RXRBP28702 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RXRBP28702 CYB561-216ENST00000582297 897 ntTSL 3 BASIC23.31■■□□□ 1.32
RXRBP28702 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RXRBP28702 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RXRBP28702 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms