Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CCL4P13236 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL4P13236 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL4P13236 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL4P13236 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.9■□□□□ 0.3
CCL4P13236 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CCL4P13236 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL4P13236 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCL4P13236 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL4P13236 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL4P13236 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL4P13236 AC093010.1-201ENST00000473625 1624 ntBASIC16.89■□□□□ 0.29
CCL4P13236 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL4P13236 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL4P13236 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCL4P13236 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL4P13236 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL4P13236 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL4P13236 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL4P13236 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
CCL4P13236 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCL4P13236 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.89■□□□□ 0.29
CCL4P13236 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.89■□□□□ 0.29
CCL4P13236 AC122714.2-201ENST00000502787 707 ntBASIC16.89■□□□□ 0.29
CCL4P13236 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CCL4P13236 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.89■□□□□ 0.29
CCL4P13236 AC010327.4-202ENST00000591484 748 ntBASIC16.89■□□□□ 0.29
CCL4P13236 AL139424.1-201ENST00000607572 797 ntBASIC16.89■□□□□ 0.29
CCL4P13236 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.89■□□□□ 0.29
CCL4P13236 AL691403.2-201ENST00000618460 490 ntBASIC16.89■□□□□ 0.29
CCL4P13236 AD001527.2-201ENST00000622994 785 ntBASIC16.89■□□□□ 0.29
CCL4P13236 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL4P13236 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL4P13236 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL4P13236 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCL4P13236 SLC25A24-204ENST00000569674 2357 ntBASIC16.89■□□□□ 0.29
CCL4P13236 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL4P13236 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL4P13236 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL4P13236 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.89■□□□□ 0.29
CCL4P13236 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL4P13236 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL4P13236 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL4P13236 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL4P13236 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.88■□□□□ 0.29
CCL4P13236 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.88■□□□□ 0.29
CCL4P13236 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
CCL4P13236 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCL4P13236 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL4P13236 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL4P13236 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL4P13236 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL4P13236 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CCL4P13236 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL4P13236 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL4P13236 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.88■□□□□ 0.29
CCL4P13236 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL4P13236 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL4P13236 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL4P13236 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.88■□□□□ 0.29
CCL4P13236 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.88■□□□□ 0.29
CCL4P13236 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL4P13236 AC009947.1-201ENST00000444350 727 ntBASIC16.88■□□□□ 0.29
CCL4P13236 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.88■□□□□ 0.29
CCL4P13236 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.88■□□□□ 0.29
CCL4P13236 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.88■□□□□ 0.29
CCL4P13236 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.88■□□□□ 0.29
CCL4P13236 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.88■□□□□ 0.29
CCL4P13236 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCL4P13236 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCL4P13236 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.88■□□□□ 0.29
CCL4P13236 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.88■□□□□ 0.29
CCL4P13236 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL4P13236 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.88■□□□□ 0.29
CCL4P13236 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL4P13236 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCL4P13236 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.87■□□□□ 0.29
CCL4P13236 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL4P13236 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCL4P13236 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCL4P13236 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.87■□□□□ 0.29
CCL4P13236 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL4P13236 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.87■□□□□ 0.29
CCL4P13236 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCL4P13236 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.87■□□□□ 0.29
CCL4P13236 UPF3AP3-201ENST00000420996 769 ntBASIC16.87■□□□□ 0.29
CCL4P13236 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.87■□□□□ 0.29
CCL4P13236 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.87■□□□□ 0.29
CCL4P13236 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCL4P13236 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.87■□□□□ 0.29
CCL4P13236 AC073592.4-201ENST00000623827 446 ntBASIC16.87■□□□□ 0.29
CCL4P13236 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL4P13236 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CCL4P13236 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.87■□□□□ 0.29
CCL4P13236 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCL4P13236 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCL4P13236 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL4P13236 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL4P13236 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCL4P13236 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms