Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPRFP10586 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPRFP10586 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PTPRFP10586 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.48■□□□□ 0.87
PTPRFP10586 RPS15P9-201ENST00000494093 319 ntBASIC20.48■□□□□ 0.87
PTPRFP10586 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.48■□□□□ 0.87
PTPRFP10586 AL596442.2-201ENST00000610240 980 ntBASIC20.48■□□□□ 0.87
PTPRFP10586 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.48■□□□□ 0.87
PTPRFP10586 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PTPRFP10586 ELL2P1-201ENST00000413990 1906 ntBASIC20.48■□□□□ 0.87
PTPRFP10586 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.48■□□□□ 0.87
PTPRFP10586 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPRFP10586 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.48■□□□□ 0.87
PTPRFP10586 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPRFP10586 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.48■□□□□ 0.87
PTPRFP10586 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPRFP10586 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.47■□□□□ 0.87
PTPRFP10586 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PTPRFP10586 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTPRFP10586 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
PTPRFP10586 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPRFP10586 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.47■□□□□ 0.87
PTPRFP10586 IGLL3P-201ENST00000412472 434 ntBASIC20.47■□□□□ 0.87
PTPRFP10586 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTPRFP10586 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.47■□□□□ 0.87
PTPRFP10586 RFPL4AP1-201ENST00000530883 850 ntBASIC20.47■□□□□ 0.87
PTPRFP10586 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.47■□□□□ 0.87
PTPRFP10586 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTPRFP10586 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPRFP10586 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
PTPRFP10586 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTPRFP10586 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.47■□□□□ 0.87
PTPRFP10586 GPR89P-201ENST00000407924 1495 ntBASIC20.47■□□□□ 0.87
PTPRFP10586 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPRFP10586 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPRFP10586 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.47■□□□□ 0.87
PTPRFP10586 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPRFP10586 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPRFP10586 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTPRFP10586 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPRFP10586 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPRFP10586 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPRFP10586 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PTPRFP10586 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.47■□□□□ 0.87
PTPRFP10586 AP000344.2-201ENST00000512987 629 ntBASIC20.47■□□□□ 0.87
PTPRFP10586 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPRFP10586 PDPK2P-202ENST00000562415 1191 ntBASIC20.47■□□□□ 0.87
PTPRFP10586 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTPRFP10586 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.47■□□□□ 0.87
PTPRFP10586 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.47■□□□□ 0.87
PTPRFP10586 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPRFP10586 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.46■□□□□ 0.87
PTPRFP10586 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.46■□□□□ 0.87
PTPRFP10586 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.46■□□□□ 0.87
PTPRFP10586 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.46■□□□□ 0.87
PTPRFP10586 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPRFP10586 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.46■□□□□ 0.87
PTPRFP10586 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.46■□□□□ 0.87
PTPRFP10586 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.46■□□□□ 0.87
PTPRFP10586 AC005829.1-201ENST00000570002 483 ntBASIC20.46■□□□□ 0.87
PTPRFP10586 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.46■□□□□ 0.87
PTPRFP10586 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.46■□□□□ 0.87
PTPRFP10586 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPRFP10586 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.46■□□□□ 0.87
PTPRFP10586 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPRFP10586 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTPRFP10586 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPRFP10586 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.46■□□□□ 0.87
PTPRFP10586 AC100803.2-201ENST00000562459 1963 ntBASIC20.46■□□□□ 0.87
PTPRFP10586 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPRFP10586 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPRFP10586 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPRFP10586 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PTPRFP10586 MRPL20P1-201ENST00000400819 433 ntBASIC20.45■□□□□ 0.86
PTPRFP10586 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.45■□□□□ 0.86
PTPRFP10586 AC109462.3-201ENST00000573934 613 ntBASIC20.45■□□□□ 0.86
PTPRFP10586 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.45■□□□□ 0.86
PTPRFP10586 C20orf181-201ENST00000623918 480 ntBASIC20.45■□□□□ 0.86
PTPRFP10586 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.45■□□□□ 0.86
PTPRFP10586 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPRFP10586 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPRFP10586 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPRFP10586 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTPRFP10586 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.45■□□□□ 0.86
PTPRFP10586 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.45■□□□□ 0.86
PTPRFP10586 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPRFP10586 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPRFP10586 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPRFP10586 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPRFP10586 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.45■□□□□ 0.86
PTPRFP10586 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.45■□□□□ 0.86
PTPRFP10586 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.45■□□□□ 0.86
PTPRFP10586 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTPRFP10586 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.45■□□□□ 0.86
PTPRFP10586 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.45■□□□□ 0.86
PTPRFP10586 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.44■□□□□ 0.86
PTPRFP10586 AL049757.1-201ENST00000616842 1596 ntBASIC20.44■□□□□ 0.86
PTPRFP10586 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTPRFP10586 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPRFP10586 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms