Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 LINC01023-201ENST00000606054 436 ntBASIC18.87■□□□□ 0.61
RARAP10276 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RARAP10276 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RARAP10276 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
RARAP10276 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.87■□□□□ 0.61
RARAP10276 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RARAP10276 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
RARAP10276 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RARAP10276 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RARAP10276 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RARAP10276 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.86■□□□□ 0.61
RARAP10276 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.86■□□□□ 0.61
RARAP10276 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RARAP10276 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RARAP10276 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RARAP10276 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RARAP10276 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RARAP10276 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
RARAP10276 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RARAP10276 SPDYE15P-201ENST00000424157 909 ntBASIC18.86■□□□□ 0.61
RARAP10276 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RARAP10276 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.86■□□□□ 0.61
RARAP10276 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.86■□□□□ 0.61
RARAP10276 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RARAP10276 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RARAP10276 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RARAP10276 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RARAP10276 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RARAP10276 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
RARAP10276 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
RARAP10276 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RARAP10276 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RARAP10276 AC141586.5-201ENST00000624546 2050 ntBASIC18.86■□□□□ 0.61
RARAP10276 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.86■□□□□ 0.61
RARAP10276 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.86■□□□□ 0.61
RARAP10276 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RARAP10276 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RARAP10276 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RARAP10276 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RARAP10276 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.86■□□□□ 0.61
RARAP10276 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RARAP10276 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.85■□□□□ 0.61
RARAP10276 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RARAP10276 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RARAP10276 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.85■□□□□ 0.61
RARAP10276 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RARAP10276 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
RARAP10276 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RARAP10276 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.85■□□□□ 0.61
RARAP10276 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RARAP10276 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RARAP10276 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.85■□□□□ 0.61
RARAP10276 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RARAP10276 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.85■□□□□ 0.61
RARAP10276 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RARAP10276 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.85■□□□□ 0.61
RARAP10276 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.85■□□□□ 0.61
RARAP10276 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.85■□□□□ 0.61
RARAP10276 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RARAP10276 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
RARAP10276 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RARAP10276 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RARAP10276 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RARAP10276 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.85■□□□□ 0.61
RARAP10276 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.85■□□□□ 0.61
RARAP10276 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RARAP10276 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.85■□□□□ 0.61
RARAP10276 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.85■□□□□ 0.61
RARAP10276 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RARAP10276 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RARAP10276 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.84■□□□□ 0.61
RARAP10276 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
RARAP10276 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RARAP10276 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RARAP10276 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RARAP10276 AL391807.1-203ENST00000604392 2365 ntBASIC18.84■□□□□ 0.61
RARAP10276 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RARAP10276 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RARAP10276 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RARAP10276 SIRPAP1-201ENST00000448467 1770 ntBASIC18.84■□□□□ 0.61
RARAP10276 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RARAP10276 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.84■□□□□ 0.61
RARAP10276 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RARAP10276 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RARAP10276 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RARAP10276 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RARAP10276 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RARAP10276 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RARAP10276 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RARAP10276 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RARAP10276 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RARAP10276 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RARAP10276 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.84■□□□□ 0.61
RARAP10276 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RARAP10276 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
RARAP10276 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RARAP10276 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RARAP10276 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.84■□□□□ 0.61
RARAP10276 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RARAP10276 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms