Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.64■□□□□ 0.73
COL1A2P08123 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL1A2P08123 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
COL1A2P08123 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.64■□□□□ 0.73
COL1A2P08123 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL1A2P08123 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
COL1A2P08123 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL1A2P08123 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
COL1A2P08123 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL1A2P08123 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.64■□□□□ 0.73
COL1A2P08123 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.64■□□□□ 0.73
COL1A2P08123 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.64■□□□□ 0.73
COL1A2P08123 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL1A2P08123 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL1A2P08123 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.63■□□□□ 0.73
COL1A2P08123 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.63■□□□□ 0.73
COL1A2P08123 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.63■□□□□ 0.73
COL1A2P08123 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A2P08123 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
COL1A2P08123 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A2P08123 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A2P08123 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A2P08123 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
COL1A2P08123 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
COL1A2P08123 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.63■□□□□ 0.73
COL1A2P08123 RPS2P1-201ENST00000434010 821 ntBASIC19.63■□□□□ 0.73
COL1A2P08123 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.63■□□□□ 0.73
COL1A2P08123 MTDHP4-201ENST00000600287 670 ntBASIC19.63■□□□□ 0.73
COL1A2P08123 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
COL1A2P08123 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
COL1A2P08123 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.63■□□□□ 0.73
COL1A2P08123 AL353593.2-201ENST00000602529 1483 ntBASIC19.63■□□□□ 0.73
COL1A2P08123 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.63■□□□□ 0.73
COL1A2P08123 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A2P08123 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A2P08123 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A2P08123 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.63■□□□□ 0.73
COL1A2P08123 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A2P08123 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A2P08123 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A2P08123 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
COL1A2P08123 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A2P08123 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A2P08123 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A2P08123 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.62■□□□□ 0.73
COL1A2P08123 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
COL1A2P08123 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.62■□□□□ 0.73
COL1A2P08123 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.62■□□□□ 0.73
COL1A2P08123 AC090164.3-201ENST00000610780 2143 ntBASIC19.62■□□□□ 0.73
COL1A2P08123 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.62■□□□□ 0.73
COL1A2P08123 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A2P08123 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A2P08123 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.62■□□□□ 0.73
COL1A2P08123 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A2P08123 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.62■□□□□ 0.73
COL1A2P08123 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.62■□□□□ 0.73
COL1A2P08123 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A2P08123 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.62■□□□□ 0.73
COL1A2P08123 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
COL1A2P08123 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A2P08123 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
COL1A2P08123 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.62■□□□□ 0.73
COL1A2P08123 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A2P08123 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A2P08123 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.62■□□□□ 0.73
COL1A2P08123 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.62■□□□□ 0.73
COL1A2P08123 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A2P08123 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.62■□□□□ 0.73
COL1A2P08123 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A2P08123 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.62■□□□□ 0.73
COL1A2P08123 AC120498.9-201ENST00000339021 3867 ntBASIC19.62■□□□□ 0.73
COL1A2P08123 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A2P08123 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.62■□□□□ 0.73
COL1A2P08123 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A2P08123 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A2P08123 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A2P08123 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A2P08123 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.61■□□□□ 0.73
COL1A2P08123 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
COL1A2P08123 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
COL1A2P08123 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL1A2P08123 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.61■□□□□ 0.73
COL1A2P08123 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.61■□□□□ 0.73
COL1A2P08123 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.61■□□□□ 0.73
COL1A2P08123 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.61■□□□□ 0.73
COL1A2P08123 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.61■□□□□ 0.73
COL1A2P08123 AL671883.3-201ENST00000603274 991 ntBASIC19.61■□□□□ 0.73
COL1A2P08123 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
COL1A2P08123 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.61■□□□□ 0.73
COL1A2P08123 AC107918.4-202ENST00000641623 219 ntBASIC19.61■□□□□ 0.73
COL1A2P08123 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.61■□□□□ 0.73
COL1A2P08123 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL1A2P08123 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL1A2P08123 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL1A2P08123 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL1A2P08123 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL1A2P08123 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
COL1A2P08123 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.61■□□□□ 0.73
COL1A2P08123 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.61■□□□□ 0.73
COL1A2P08123 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms