Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHGBP05060 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHGBP05060 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.58■■□□□ 1.04
CHGBP05060 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHGBP05060 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CHGBP05060 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CHGBP05060 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHGBP05060 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHGBP05060 AC010460.3-201ENST00000511359 1579 ntBASIC21.57■■□□□ 1.04
CHGBP05060 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHGBP05060 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHGBP05060 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CHGBP05060 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHGBP05060 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHGBP05060 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHGBP05060 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.57■■□□□ 1.04
CHGBP05060 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.57■■□□□ 1.04
CHGBP05060 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHGBP05060 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHGBP05060 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CHGBP05060 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHGBP05060 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
CHGBP05060 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.57■■□□□ 1.04
CHGBP05060 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHGBP05060 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.57■■□□□ 1.04
CHGBP05060 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.57■■□□□ 1.04
CHGBP05060 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.57■■□□□ 1.04
CHGBP05060 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.57■■□□□ 1.04
CHGBP05060 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.57■■□□□ 1.04
CHGBP05060 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.57■■□□□ 1.04
CHGBP05060 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHGBP05060 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHGBP05060 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHGBP05060 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHGBP05060 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHGBP05060 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHGBP05060 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.56■■□□□ 1.04
CHGBP05060 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHGBP05060 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHGBP05060 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHGBP05060 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHGBP05060 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.56■■□□□ 1.04
CHGBP05060 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHGBP05060 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHGBP05060 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHGBP05060 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.56■■□□□ 1.04
CHGBP05060 AC246785.2-201ENST00000432512 513 ntBASIC21.56■■□□□ 1.04
CHGBP05060 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.56■■□□□ 1.04
CHGBP05060 AC104819.1-201ENST00000504587 486 ntBASIC21.56■■□□□ 1.04
CHGBP05060 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.56■■□□□ 1.04
CHGBP05060 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHGBP05060 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.56■■□□□ 1.04
CHGBP05060 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.56■■□□□ 1.04
CHGBP05060 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.56■■□□□ 1.04
CHGBP05060 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHGBP05060 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.56■■□□□ 1.04
CHGBP05060 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.56■■□□□ 1.04
CHGBP05060 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHGBP05060 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHGBP05060 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHGBP05060 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHGBP05060 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHGBP05060 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHGBP05060 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.56■■□□□ 1.04
CHGBP05060 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHGBP05060 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CHGBP05060 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHGBP05060 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CHGBP05060 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CHGBP05060 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHGBP05060 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHGBP05060 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.55■■□□□ 1.04
CHGBP05060 FLJ13224-201ENST00000313737 1514 ntBASIC21.55■■□□□ 1.04
CHGBP05060 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHGBP05060 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHGBP05060 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHGBP05060 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHGBP05060 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHGBP05060 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHGBP05060 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CHGBP05060 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CHGBP05060 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.55■■□□□ 1.04
CHGBP05060 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.55■■□□□ 1.04
CHGBP05060 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.55■■□□□ 1.04
CHGBP05060 Z69720.1-201ENST00000601483 472 ntBASIC21.55■■□□□ 1.04
CHGBP05060 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CHGBP05060 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.55■■□□□ 1.04
CHGBP05060 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.55■■□□□ 1.04
CHGBP05060 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHGBP05060 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHGBP05060 AC068880.1-201ENST00000507289 2297 ntBASIC21.55■■□□□ 1.04
CHGBP05060 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHGBP05060 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHGBP05060 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHGBP05060 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHGBP05060 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.55■■□□□ 1.04
CHGBP05060 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHGBP05060 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHGBP05060 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.54■■□□□ 1.04
CHGBP05060 AC008764.6-201ENST00000595909 2069 ntBASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms