Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 AC129507.2-201ENST00000572499 748 ntTSL 3 BASIC20.61■□□□□ 0.89
MYCNP04198 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.61■□□□□ 0.89
MYCNP04198 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
MYCNP04198 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MYCNP04198 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MYCNP04198 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MYCNP04198 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
MYCNP04198 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MYCNP04198 LINC01521-201ENST00000504184 1943 ntBASIC20.61■□□□□ 0.89
MYCNP04198 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
MYCNP04198 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
MYCNP04198 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MYCNP04198 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.6■□□□□ 0.89
MYCNP04198 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.6■□□□□ 0.89
MYCNP04198 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.6■□□□□ 0.89
MYCNP04198 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.6■□□□□ 0.89
MYCNP04198 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.6■□□□□ 0.89
MYCNP04198 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MYCNP04198 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MYCNP04198 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MYCNP04198 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
MYCNP04198 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.6■□□□□ 0.89
MYCNP04198 AC114495.2-201ENST00000452686 437 ntBASIC20.6■□□□□ 0.89
MYCNP04198 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.6■□□□□ 0.89
MYCNP04198 AC073648.2-201ENST00000510116 352 ntBASIC20.6■□□□□ 0.89
MYCNP04198 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.6■□□□□ 0.89
MYCNP04198 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.6■□□□□ 0.89
MYCNP04198 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.6■□□□□ 0.89
MYCNP04198 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.6■□□□□ 0.89
MYCNP04198 BNIP3P18-201ENST00000593976 575 ntBASIC20.6■□□□□ 0.89
MYCNP04198 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.6■□□□□ 0.89
MYCNP04198 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.6■□□□□ 0.89
MYCNP04198 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.6■□□□□ 0.89
MYCNP04198 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.6■□□□□ 0.89
MYCNP04198 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MYCNP04198 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.6■□□□□ 0.89
MYCNP04198 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.6■□□□□ 0.89
MYCNP04198 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.6■□□□□ 0.89
MYCNP04198 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MYCNP04198 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MYCNP04198 AC008764.6-201ENST00000595909 2069 ntBASIC20.6■□□□□ 0.89
MYCNP04198 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
MYCNP04198 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MYCNP04198 AC243591.1-201ENST00000452967 1364 ntBASIC20.59■□□□□ 0.89
MYCNP04198 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MYCNP04198 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MYCNP04198 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MYCNP04198 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MYCNP04198 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
MYCNP04198 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.59■□□□□ 0.89
MYCNP04198 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.59■□□□□ 0.89
MYCNP04198 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.59■□□□□ 0.89
MYCNP04198 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MYCNP04198 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MYCNP04198 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MYCNP04198 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.59■□□□□ 0.89
MYCNP04198 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.59■□□□□ 0.89
MYCNP04198 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MYCNP04198 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.59■□□□□ 0.89
MYCNP04198 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MYCNP04198 RPS3AP29-201ENST00000437728 769 ntBASIC20.59■□□□□ 0.89
MYCNP04198 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MYCNP04198 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.59■□□□□ 0.89
MYCNP04198 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.59■□□□□ 0.89
MYCNP04198 AL049840.3-201ENST00000602669 611 ntBASIC20.59■□□□□ 0.89
MYCNP04198 AC092574.1-201ENST00000609771 420 ntBASIC20.59■□□□□ 0.89
MYCNP04198 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
MYCNP04198 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MYCNP04198 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
MYCNP04198 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.59■□□□□ 0.89
MYCNP04198 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.59■□□□□ 0.89
MYCNP04198 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MYCNP04198 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
MYCNP04198 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MYCNP04198 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
MYCNP04198 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
MYCNP04198 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MYCNP04198 PMS2P7-201ENST00000506558 1336 ntBASIC20.58■□□□□ 0.89
MYCNP04198 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MYCNP04198 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MYCNP04198 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
MYCNP04198 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MYCNP04198 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MYCNP04198 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.58■□□□□ 0.89
MYCNP04198 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC20.58■□□□□ 0.89
MYCNP04198 AL157385.1-201ENST00000446973 268 ntBASIC20.58■□□□□ 0.89
MYCNP04198 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
MYCNP04198 RPL13AP23-201ENST00000480739 586 ntBASIC20.58■□□□□ 0.89
MYCNP04198 AC073611.1-201ENST00000550263 647 ntTSL 2 BASIC20.58■□□□□ 0.89
MYCNP04198 CNIH1-203ENST00000553660 785 ntTSL 2 BASIC20.58■□□□□ 0.89
MYCNP04198 AC126365.2-201ENST00000580630 379 ntBASIC20.58■□□□□ 0.89
MYCNP04198 BNIP3P39-201ENST00000601077 554 ntBASIC20.58■□□□□ 0.89
MYCNP04198 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.58■□□□□ 0.89
MYCNP04198 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MYCNP04198 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
MYCNP04198 AC008033.3-201ENST00000612531 1407 ntBASIC20.58■□□□□ 0.88
MYCNP04198 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
MYCNP04198 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MYCNP04198 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
MYCNP04198 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms