Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.77■□□□□ 0.6
LMNAP02545 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.77■□□□□ 0.6
LMNAP02545 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.77■□□□□ 0.6
LMNAP02545 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.77■□□□□ 0.6
LMNAP02545 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.77■□□□□ 0.6
LMNAP02545 AC027796.2-201ENST00000575326 344 ntBASIC18.77■□□□□ 0.6
LMNAP02545 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
LMNAP02545 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.77■□□□□ 0.6
LMNAP02545 AC140113.2-201ENST00000604370 208 ntBASIC18.77■□□□□ 0.6
LMNAP02545 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.77■□□□□ 0.6
LMNAP02545 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LMNAP02545 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.77■□□□□ 0.6
LMNAP02545 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LMNAP02545 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LMNAP02545 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
LMNAP02545 AC233702.3-201ENST00000578656 1387 ntBASIC18.77■□□□□ 0.6
LMNAP02545 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LMNAP02545 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LMNAP02545 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
LMNAP02545 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LMNAP02545 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LMNAP02545 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LMNAP02545 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.76■□□□□ 0.59
LMNAP02545 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LMNAP02545 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LMNAP02545 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LMNAP02545 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LMNAP02545 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LMNAP02545 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LMNAP02545 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.76■□□□□ 0.59
LMNAP02545 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.76■□□□□ 0.59
LMNAP02545 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.76■□□□□ 0.59
LMNAP02545 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.76■□□□□ 0.59
LMNAP02545 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
LMNAP02545 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
LMNAP02545 OR6D1P-202ENST00000641007 5290 ntBASIC18.76■□□□□ 0.59
LMNAP02545 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.76■□□□□ 0.59
LMNAP02545 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.76■□□□□ 0.59
LMNAP02545 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LMNAP02545 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
LMNAP02545 AC139713.2-201ENST00000641328 2723 ntBASIC18.76■□□□□ 0.59
LMNAP02545 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LMNAP02545 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LMNAP02545 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LMNAP02545 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LMNAP02545 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LMNAP02545 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LMNAP02545 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.76■□□□□ 0.59
LMNAP02545 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LMNAP02545 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LMNAP02545 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LMNAP02545 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
LMNAP02545 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LMNAP02545 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LMNAP02545 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LMNAP02545 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.75■□□□□ 0.59
LMNAP02545 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
LMNAP02545 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LMNAP02545 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LMNAP02545 AF186996.4-201ENST00000467186 377 ntBASIC18.75■□□□□ 0.59
LMNAP02545 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.75■□□□□ 0.59
LMNAP02545 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LMNAP02545 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.75■□□□□ 0.59
LMNAP02545 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LMNAP02545 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LMNAP02545 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LMNAP02545 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LMNAP02545 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LMNAP02545 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LMNAP02545 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
LMNAP02545 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LMNAP02545 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LMNAP02545 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
LMNAP02545 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LMNAP02545 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LMNAP02545 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LMNAP02545 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LMNAP02545 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LMNAP02545 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
LMNAP02545 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LMNAP02545 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
LMNAP02545 Z83836.1-201ENST00000624605 1642 ntBASIC18.74■□□□□ 0.59
LMNAP02545 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LMNAP02545 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LMNAP02545 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LMNAP02545 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
LMNAP02545 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LMNAP02545 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LMNAP02545 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LMNAP02545 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
LMNAP02545 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.74■□□□□ 0.59
LMNAP02545 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LMNAP02545 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LMNAP02545 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LMNAP02545 ZNF259P1-201ENST00000407656 1365 ntBASIC18.74■□□□□ 0.59
LMNAP02545 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LMNAP02545 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LMNAP02545 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LMNAP02545 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LMNAP02545 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms