Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
IFNB1P01574 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.63■□□□□ 0.57
IFNB1P01574 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.63■□□□□ 0.57
IFNB1P01574 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.63■□□□□ 0.57
IFNB1P01574 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.63■□□□□ 0.57
IFNB1P01574 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.63■□□□□ 0.57
IFNB1P01574 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFNB1P01574 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
IFNB1P01574 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFNB1P01574 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.63■□□□□ 0.57
IFNB1P01574 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
IFNB1P01574 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.63■□□□□ 0.57
IFNB1P01574 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
IFNB1P01574 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFNB1P01574 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
IFNB1P01574 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.62■□□□□ 0.57
IFNB1P01574 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IFNB1P01574 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IFNB1P01574 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
IFNB1P01574 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
IFNB1P01574 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
IFNB1P01574 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
IFNB1P01574 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IFNB1P01574 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
IFNB1P01574 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.62■□□□□ 0.57
IFNB1P01574 SEC1P-202ENST00000473944 940 ntBASIC18.62■□□□□ 0.57
IFNB1P01574 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.62■□□□□ 0.57
IFNB1P01574 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
IFNB1P01574 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.62■□□□□ 0.57
IFNB1P01574 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
IFNB1P01574 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.62■□□□□ 0.57
IFNB1P01574 AC010947.1-201ENST00000623454 693 ntBASIC18.62■□□□□ 0.57
IFNB1P01574 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IFNB1P01574 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
IFNB1P01574 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.62■□□□□ 0.57
IFNB1P01574 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
IFNB1P01574 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.62■□□□□ 0.57
IFNB1P01574 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IFNB1P01574 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.62■□□□□ 0.57
IFNB1P01574 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.62■□□□□ 0.57
IFNB1P01574 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
IFNB1P01574 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IFNB1P01574 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
IFNB1P01574 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.61■□□□□ 0.57
IFNB1P01574 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IFNB1P01574 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.61■□□□□ 0.57
IFNB1P01574 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
IFNB1P01574 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IFNB1P01574 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IFNB1P01574 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IFNB1P01574 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.61■□□□□ 0.57
IFNB1P01574 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IFNB1P01574 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
IFNB1P01574 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
IFNB1P01574 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IFNB1P01574 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.61■□□□□ 0.57
IFNB1P01574 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IFNB1P01574 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IFNB1P01574 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.61■□□□□ 0.57
IFNB1P01574 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.61■□□□□ 0.57
IFNB1P01574 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IFNB1P01574 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
IFNB1P01574 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
IFNB1P01574 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
IFNB1P01574 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
IFNB1P01574 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
IFNB1P01574 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.61■□□□□ 0.57
IFNB1P01574 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IFNB1P01574 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
IFNB1P01574 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
IFNB1P01574 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFNB1P01574 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFNB1P01574 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IFNB1P01574 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
IFNB1P01574 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFNB1P01574 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.6■□□□□ 0.57
IFNB1P01574 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.6■□□□□ 0.57
IFNB1P01574 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
IFNB1P01574 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IFNB1P01574 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFNB1P01574 MMP23A-201ENST00000234610 1017 ntBASIC18.6■□□□□ 0.57
IFNB1P01574 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFNB1P01574 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.6■□□□□ 0.57
IFNB1P01574 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.6■□□□□ 0.57
IFNB1P01574 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IFNB1P01574 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IFNB1P01574 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.6■□□□□ 0.57
IFNB1P01574 ECEL1P2-202ENST00000465689 757 ntBASIC18.6■□□□□ 0.57
IFNB1P01574 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
IFNB1P01574 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.6■□□□□ 0.57
IFNB1P01574 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
IFNB1P01574 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.6■□□□□ 0.57
IFNB1P01574 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.6■□□□□ 0.57
IFNB1P01574 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IFNB1P01574 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.6■□□□□ 0.57
IFNB1P01574 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFNB1P01574 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFNB1P01574 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFNB1P01574 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IFNB1P01574 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms